Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AL671277.2-201ENST00000458060 996 ntBASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 KRT8P32-201ENST00000512863 1461 ntBASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SCN4BQ8IWT1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN4BQ8IWT1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCN4BQ8IWT1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCN4BQ8IWT1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 AL161938.1-201ENST00000569833 2180 ntBASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN4BQ8IWT1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 SPDYE15P-201ENST00000424157 909 ntBASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 AC112907.2-201ENST00000448639 330 ntBASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 AC112497.1-201ENST00000624824 639 ntBASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 AL358472.4-201ENST00000633140 710 ntBASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN4BQ8IWT1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 AL049812.1-201ENST00000432563 2267 ntBASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms