Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 PKD1P1-201ENST00000458669 6805 ntBASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 ANO7L1-203ENST00000602586 1720 ntBASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 ESRRAP1-201ENST00000400596 1257 ntBASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 AL390961.4-201ENST00000623958 2535 ntBASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 FZD10-202ENST00000539839 3282 ntBASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 KRT16P5-201ENST00000455284 522 ntBASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CCDC50Q8IVM0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC50Q8IVM0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 KRT8P41-201ENST00000533985 1514 ntBASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms