Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 PCDH8P1-201ENST00000428983 2773 ntBASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD2Q8IV50 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
LYSMD2Q8IV50 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 UBALD1-205ENST00000590891 2641 ntBASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 AC123595.1-201ENST00000440769 1046 ntBASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD2Q8IV50 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms