Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
NPAS4Q8IUM7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 IGHGP-201ENST00000390555 1178 ntBASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 AC074051.2-201ENST00000565115 352 ntBASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 AC104692.2-201ENST00000603054 253 ntBASIC20.08■□□□□ 0.81
NPAS4Q8IUM7 AC233702.3-201ENST00000578656 1387 ntBASIC20.08■□□□□ 0.8
NPAS4Q8IUM7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 AL160237.2-201ENST00000556165 472 ntBASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 Z69720.1-201ENST00000601483 472 ntBASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 AC024563.2-201ENST00000603282 481 ntBASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS4Q8IUM7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 AC079781.3-201ENST00000449110 356 ntBASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 AC009065.1-201ENST00000564055 1225 ntBASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 AC138894.3-201ENST00000603787 634 ntBASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 FP475955.4-201ENST00000623131 1990 ntBASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.06■□□□□ 0.8
NPAS4Q8IUM7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 LINC00167-201ENST00000530583 1419 ntBASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 AP000347.1-202ENST00000435868 847 ntBASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms