Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.73■□□□□ 0.59
LDB1Q86U70 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LDB1Q86U70 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB1Q86U70 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
LDB1Q86U70 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB1Q86U70 AC096733.2-201ENST00000609937 1394 ntBASIC18.73■□□□□ 0.59
LDB1Q86U70 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB1Q86U70 MIR718-201ENST00000390190 70 ntBASIC18.73■□□□□ 0.59
LDB1Q86U70 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB1Q86U70 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.73■□□□□ 0.59
LDB1Q86U70 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.73■□□□□ 0.59
LDB1Q86U70 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
LDB1Q86U70 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.73■□□□□ 0.59
LDB1Q86U70 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LDB1Q86U70 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LDB1Q86U70 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB1Q86U70 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB1Q86U70 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LDB1Q86U70 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LDB1Q86U70 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB1Q86U70 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.72■□□□□ 0.59
LDB1Q86U70 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB1Q86U70 AC126763.1-201ENST00000552015 2118 ntBASIC18.72■□□□□ 0.59
LDB1Q86U70 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LDB1Q86U70 AP006294.2-201ENST00000641667 209 ntBASIC18.72■□□□□ 0.59
LDB1Q86U70 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB1Q86U70 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB1Q86U70 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB1Q86U70 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LDB1Q86U70 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB1Q86U70 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB1Q86U70 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 RCC2P3-201ENST00000418112 1537 ntBASIC18.71■□□□□ 0.59
LDB1Q86U70 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LDB1Q86U70 AL390955.1-201ENST00000428694 934 ntBASIC18.71■□□□□ 0.59
LDB1Q86U70 RBM17P1-201ENST00000453646 1190 ntBASIC18.71■□□□□ 0.59
LDB1Q86U70 TSPY15P-201ENST00000457163 923 ntBASIC18.71■□□□□ 0.59
LDB1Q86U70 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.71■□□□□ 0.59
LDB1Q86U70 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 DGCR10-201ENST00000609839 495 ntBASIC18.71■□□□□ 0.59
LDB1Q86U70 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LDB1Q86U70 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.71■□□□□ 0.59
LDB1Q86U70 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
LDB1Q86U70 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB1Q86U70 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
LDB1Q86U70 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LDB1Q86U70 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LDB1Q86U70 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LDB1Q86U70 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LDB1Q86U70 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LDB1Q86U70 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LDB1Q86U70 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
LDB1Q86U70 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LDB1Q86U70 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB1Q86U70 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms