Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 KRT18P23-201ENST00000435622 1283 ntBASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 AL359075.1-203ENST00000462729 1002 ntBASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 AC087388.1-201ENST00000571370 1112 ntBASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GDPD4Q6W3E5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 AC034236.2-201ENST00000606662 1610 ntBASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 KRT8P7-201ENST00000533003 1432 ntBASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDPD4Q6W3E5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 AL357033.4-201ENST00000617703 1807 ntBASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 STARP1-201ENST00000397973 869 ntBASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 SEC1P-202ENST00000473944 940 ntBASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 HOXB1-202ENST00000577092 1414 ntBASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDPD4Q6W3E5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms