Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 AC008622.2-201ENST00000617006 1229 ntBASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 AP001412.1-201ENST00000608405 714 ntBASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 AC126763.1-201ENST00000552015 2118 ntBASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF549Q6P9A3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 MFAP1P1-201ENST00000442257 1255 ntBASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AC008550.1-201ENST00000511500 884 ntBASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 DGCR10-201ENST00000609839 495 ntBASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AC026471.5-201ENST00000615068 467 ntBASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 AL357033.4-201ENST00000617703 1807 ntBASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF549Q6P9A3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF549Q6P9A3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms