Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 MIR940-201ENST00000401276 94 ntBASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 KRT8P32-201ENST00000512863 1461 ntBASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 LINC02084-201ENST00000606069 1096 ntBASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 MTMR9LP-203ENST00000426597 1545 ntBASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 AC106730.1-201ENST00000566722 1090 ntBASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 AC117500.6-201ENST00000624871 588 ntBASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.59□□□□□ -0.39
VPS13DQ5THJ4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VPS13DQ5THJ4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VPS13DQ5THJ4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VPS13DQ5THJ4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
VPS13DQ5THJ4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.58□□□□□ -0.39
VPS13DQ5THJ4 AC006333.2-201ENST00000607957 2099 ntBASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 AC104819.1-201ENST00000504587 486 ntBASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13DQ5THJ4 AL590627.1-203ENST00000421194 1026 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms