Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 AC067852.2-201ENST00000590513 2313 ntBASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 AC008764.6-201ENST00000595909 2069 ntBASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 HCG11-201ENST00000411553 5696 ntBASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.72■□□□□ 0.43
RUNDC3AQ59EK9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 AC142086.2-201ENST00000569753 217 ntBASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 KRT8P11-201ENST00000409686 1436 ntBASIC17.71■□□□□ 0.43
RUNDC3AQ59EK9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RUNDC3AQ59EK9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.71■□□□□ 0.42
RUNDC3AQ59EK9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RUNDC3AQ59EK9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 AP000997.3-201ENST00000623333 2250 ntBASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 MTDHP1-201ENST00000605323 784 ntBASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 MYC-208ENST00000641036 567 ntBASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 KRT8P3-201ENST00000519669 1449 ntBASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms