Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HLA-BQ31612 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-BQ31612 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
HLA-BQ31612 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 AL592071.1-201ENST00000611956 408 ntBASIC18.18■□□□□ 0.5
HLA-BQ31612 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.18■□□□□ 0.5
HLA-BQ31612 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 KRT8P32-201ENST00000512863 1461 ntBASIC18.18■□□□□ 0.5
HLA-BQ31612 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-BQ31612 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HLA-BQ31612 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-BQ31612 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-BQ31612 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
HLA-BQ31612 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-BQ31612 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-BQ31612 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-BQ31612 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-BQ31612 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-BQ31612 AC024563.2-201ENST00000603282 481 ntBASIC18.17■□□□□ 0.5
HLA-BQ31612 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-BQ31612 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-BQ31612 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HLA-BQ31612 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-BQ31612 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HLA-BQ31612 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-BQ31612 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HLA-BQ31612 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-BQ31612 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HLA-BQ31612 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 RN7SL606P-201ENST00000472779 293 ntBASIC18.16■□□□□ 0.5
HLA-BQ31612 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-BQ31612 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.16■□□□□ 0.5
HLA-BQ31612 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-BQ31612 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 HLA-A-201ENST00000376802 1334 ntBASIC18.16■□□□□ 0.5
HLA-BQ31612 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-BQ31612 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-BQ31612 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-BQ31612 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 FEM1AP3-201ENST00000403722 1741 ntBASIC18.15■□□□□ 0.5
HLA-BQ31612 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HLA-BQ31612 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HLA-BQ31612 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-BQ31612 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-BQ31612 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-BQ31612 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
HLA-BQ31612 VENTXP7-201ENST00000475503 772 ntBASIC18.15■□□□□ 0.5
HLA-BQ31612 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.15■□□□□ 0.5
HLA-BQ31612 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-BQ31612 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-BQ31612 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms