Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.14■□□□□ 0.5
RSPO4Q2I0M5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 PLK5-205ENST00000642079 1969 ntBASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO4Q2I0M5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 AP001271.2-201ENST00000624018 1556 ntBASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 IGHGP-201ENST00000390555 1178 ntBASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 COX20P2-201ENST00000452636 358 ntBASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 BNIP3P18-201ENST00000593976 575 ntBASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO4Q2I0M5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 AC092720.2-201ENST00000602388 1665 ntBASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 AC096582.2-201ENST00000510860 516 ntBASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO4Q2I0M5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 FGFR3P6-201ENST00000457012 610 ntBASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 HLA-J-202ENST00000469281 1241 ntBASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms