Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 AL135905.2-201ENST00000584934 1404 ntBASIC12.42□□□□□ -0.42
SYCNQ0VAF6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 AC093525.10-201ENST00000625130 1569 ntBASIC12.42□□□□□ -0.42
SYCNQ0VAF6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SYCNQ0VAF6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.41□□□□□ -0.42
SYCNQ0VAF6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TSPY20P-201ENST00000450910 630 ntBASIC12.41□□□□□ -0.42
SYCNQ0VAF6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AC026271.3-201ENST00000571884 352 ntBASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AF186192.3-201ENST00000583427 947 ntBASIC12.41□□□□□ -0.42
SYCNQ0VAF6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SYCNQ0VAF6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AL359736.2-201ENST00000621992 437 ntBASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 AL031598.1-201ENST00000561511 1773 ntBASIC12.4□□□□□ -0.42
SYCNQ0VAF6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SYCNQ0VAF6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms