Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.84■□□□□ 0.77
UBE3AQ05086 GPR32P1-201ENST00000601788 811 ntBASIC19.84■□□□□ 0.77
UBE3AQ05086 AL353801.3-201ENST00000609898 542 ntBASIC19.84■□□□□ 0.77
UBE3AQ05086 GPALPP1-207ENST00000611650 899 ntBASIC19.84■□□□□ 0.77
UBE3AQ05086 AC023511.2-201ENST00000618803 211 ntBASIC19.84■□□□□ 0.77
UBE3AQ05086 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3AQ05086 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3AQ05086 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE3AQ05086 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE3AQ05086 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3AQ05086 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBE3AQ05086 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE3AQ05086 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3AQ05086 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE3AQ05086 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3AQ05086 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3AQ05086 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.83■□□□□ 0.77
UBE3AQ05086 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3AQ05086 SLC25A24-204ENST00000569674 2357 ntBASIC19.83■□□□□ 0.77
UBE3AQ05086 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3AQ05086 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.83■□□□□ 0.77
UBE3AQ05086 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.83■□□□□ 0.77
UBE3AQ05086 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE3AQ05086 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE3AQ05086 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.83■□□□□ 0.77
UBE3AQ05086 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UBE3AQ05086 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
UBE3AQ05086 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
UBE3AQ05086 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3AQ05086 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.83■□□□□ 0.76
UBE3AQ05086 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3AQ05086 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3AQ05086 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE3AQ05086 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3AQ05086 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
UBE3AQ05086 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.83■□□□□ 0.76
UBE3AQ05086 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
UBE3AQ05086 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3AQ05086 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
UBE3AQ05086 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3AQ05086 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3AQ05086 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
UBE3AQ05086 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.82■□□□□ 0.76
UBE3AQ05086 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE3AQ05086 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
UBE3AQ05086 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.82■□□□□ 0.76
UBE3AQ05086 AC138894.3-201ENST00000603787 634 ntBASIC19.82■□□□□ 0.76
UBE3AQ05086 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
UBE3AQ05086 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3AQ05086 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3AQ05086 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3AQ05086 Z82202.1-201ENST00000623446 1880 ntBASIC19.82■□□□□ 0.76
UBE3AQ05086 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3AQ05086 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3AQ05086 AC034236.2-201ENST00000606662 1610 ntBASIC19.81■□□□□ 0.76
UBE3AQ05086 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 IGHGP-201ENST00000390555 1178 ntBASIC19.81■□□□□ 0.76
UBE3AQ05086 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
UBE3AQ05086 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
UBE3AQ05086 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 GUSBP12-201ENST00000513727 720 ntBASIC19.81■□□□□ 0.76
UBE3AQ05086 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3AQ05086 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 AC004263.2-201ENST00000617183 678 ntBASIC19.81■□□□□ 0.76
UBE3AQ05086 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE3AQ05086 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3AQ05086 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBE3AQ05086 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
UBE3AQ05086 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3AQ05086 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3AQ05086 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3AQ05086 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms