Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL20P78556 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL20P78556 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CCL20P78556 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 RASA4CP-201ENST00000424092 1398 ntBASIC14.78□□□□□ -0.04
CCL20P78556 CICP6-201ENST00000457191 2729 ntBASIC14.78□□□□□ -0.04
CCL20P78556 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CCL20P78556 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL20P78556 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 AP001330.3-201ENST00000520123 633 ntBASIC14.78□□□□□ -0.04
CCL20P78556 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CCL20P78556 AC016405.3-201ENST00000607710 860 ntBASIC14.78□□□□□ -0.04
CCL20P78556 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCL20P78556 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CCL20P78556 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL20P78556 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.77□□□□□ -0.04
CCL20P78556 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CCL20P78556 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.77□□□□□ -0.04
CCL20P78556 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.77□□□□□ -0.04
CCL20P78556 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.77□□□□□ -0.04
CCL20P78556 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCL20P78556 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.77□□□□□ -0.04
CCL20P78556 REXO1L9P-201ENST00000604264 2108 ntBASIC14.77□□□□□ -0.04
CCL20P78556 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.77□□□□□ -0.04
CCL20P78556 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCL20P78556 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.77□□□□□ -0.04
CCL20P78556 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL20P78556 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CCL20P78556 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL20P78556 AL356441.2-201ENST00000443009 864 ntBASIC14.77□□□□□ -0.05
CCL20P78556 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL20P78556 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL20P78556 AC105020.6-201ENST00000621523 1217 ntBASIC14.77□□□□□ -0.05
CCL20P78556 AL035685.1-201ENST00000636663 812 ntBASIC14.77□□□□□ -0.05
CCL20P78556 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL20P78556 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL20P78556 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL20P78556 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCL20P78556 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCL20P78556 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCL20P78556 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL20P78556 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.77□□□□□ -0.05
CCL20P78556 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL20P78556 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL20P78556 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL20P78556 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CCL20P78556 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCL20P78556 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCL20P78556 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.76□□□□□ -0.05
CCL20P78556 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.76□□□□□ -0.05
CCL20P78556 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.76□□□□□ -0.05
CCL20P78556 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL20P78556 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms