Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.78■■□□□ 1.08
IRX3P78415 KRT8P26-201ENST00000534154 1276 ntBASIC21.78■■□□□ 1.08
IRX3P78415 AP002414.4-201ENST00000589764 1148 ntBASIC21.78■■□□□ 1.08
IRX3P78415 AL136038.4-201ENST00000603606 1261 ntBASIC21.78■■□□□ 1.08
IRX3P78415 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
IRX3P78415 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
IRX3P78415 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.78■■□□□ 1.08
IRX3P78415 AC093525.10-201ENST00000625130 1569 ntBASIC21.78■■□□□ 1.08
IRX3P78415 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
IRX3P78415 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
IRX3P78415 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 AC004870.1-201ENST00000315132 882 ntBASIC21.77■■□□□ 1.08
IRX3P78415 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
IRX3P78415 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.77■■□□□ 1.08
IRX3P78415 AC246785.2-201ENST00000432512 513 ntBASIC21.77■■□□□ 1.08
IRX3P78415 HLA-F-220ENST00000434407 884 ntBASIC21.77■■□□□ 1.08
IRX3P78415 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.77■■□□□ 1.08
IRX3P78415 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
IRX3P78415 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.77■■□□□ 1.08
IRX3P78415 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.77■■□□□ 1.08
IRX3P78415 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.77■■□□□ 1.08
IRX3P78415 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.77■■□□□ 1.08
IRX3P78415 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.77■■□□□ 1.08
IRX3P78415 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.77■■□□□ 1.08
IRX3P78415 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.77■■□□□ 1.08
IRX3P78415 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
IRX3P78415 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX3P78415 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
IRX3P78415 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.77■■□□□ 1.07
IRX3P78415 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.76■■□□□ 1.07
IRX3P78415 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.76■■□□□ 1.07
IRX3P78415 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 MIR3917-201ENST00000580971 93 ntBASIC21.76■■□□□ 1.07
IRX3P78415 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.76■■□□□ 1.07
IRX3P78415 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.76■■□□□ 1.07
IRX3P78415 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.76■■□□□ 1.07
IRX3P78415 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.76■■□□□ 1.07
IRX3P78415 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
IRX3P78415 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX3P78415 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.76■■□□□ 1.07
IRX3P78415 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.75■■□□□ 1.07
IRX3P78415 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
IRX3P78415 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.75■■□□□ 1.07
IRX3P78415 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.75■■□□□ 1.07
IRX3P78415 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 CHCHD2P8-201ENST00000429873 447 ntBASIC21.75■■□□□ 1.07
IRX3P78415 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.75■■□□□ 1.07
IRX3P78415 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.75■■□□□ 1.07
IRX3P78415 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.75■■□□□ 1.07
IRX3P78415 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.75■■□□□ 1.07
IRX3P78415 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.75■■□□□ 1.07
IRX3P78415 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
IRX3P78415 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX3P78415 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 AL391807.1-203ENST00000604392 2365 ntBASIC21.74■■□□□ 1.07
IRX3P78415 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
IRX3P78415 AL845331.1-201ENST00000424978 1190 ntBASIC21.74■■□□□ 1.07
IRX3P78415 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
IRX3P78415 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.74■■□□□ 1.07
IRX3P78415 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.74■■□□□ 1.07
IRX3P78415 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms