Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
USP46P62068 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 AC005332.7-201ENST00000614046 2005 ntBASIC19.71■□□□□ 0.75
USP46P62068 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP46P62068 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP46P62068 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP46P62068 SPDYE15P-201ENST00000424157 909 ntBASIC19.71■□□□□ 0.75
USP46P62068 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.71■□□□□ 0.75
USP46P62068 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.71■□□□□ 0.75
USP46P62068 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.71■□□□□ 0.75
USP46P62068 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.71■□□□□ 0.75
USP46P62068 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
USP46P62068 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.71■□□□□ 0.75
USP46P62068 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP46P62068 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.75
USP46P62068 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP46P62068 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.7■□□□□ 0.74
USP46P62068 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.7■□□□□ 0.74
USP46P62068 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.7■□□□□ 0.74
USP46P62068 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.7■□□□□ 0.74
USP46P62068 AC024243.1-201ENST00000609234 778 ntBASIC19.7■□□□□ 0.74
USP46P62068 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.7■□□□□ 0.74
USP46P62068 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.7■□□□□ 0.74
USP46P62068 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP46P62068 KRT8P32-201ENST00000512863 1461 ntBASIC19.7■□□□□ 0.74
USP46P62068 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.7■□□□□ 0.74
USP46P62068 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP46P62068 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.7■□□□□ 0.74
USP46P62068 AL049812.1-201ENST00000432563 2267 ntBASIC19.7■□□□□ 0.74
USP46P62068 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP46P62068 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
USP46P62068 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.7■□□□□ 0.74
USP46P62068 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
USP46P62068 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.69■□□□□ 0.74
USP46P62068 AL109659.2-201ENST00000606809 1674 ntBASIC19.69■□□□□ 0.74
USP46P62068 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.69■□□□□ 0.74
USP46P62068 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
USP46P62068 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.69■□□□□ 0.74
USP46P62068 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.69■□□□□ 0.74
USP46P62068 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.69■□□□□ 0.74
USP46P62068 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.69■□□□□ 0.74
USP46P62068 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.69■□□□□ 0.74
USP46P62068 AL358472.4-201ENST00000633140 710 ntBASIC19.69■□□□□ 0.74
USP46P62068 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP46P62068 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP46P62068 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.69■□□□□ 0.74
USP46P62068 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.68■□□□□ 0.74
USP46P62068 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
USP46P62068 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.68■□□□□ 0.74
USP46P62068 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
USP46P62068 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 AL671277.2-201ENST00000458060 996 ntBASIC19.68■□□□□ 0.74
USP46P62068 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.68■□□□□ 0.74
USP46P62068 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.68■□□□□ 0.74
USP46P62068 HYMAI.1-201ENST00000620949 238 ntBASIC19.68■□□□□ 0.74
USP46P62068 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
USP46P62068 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.68■□□□□ 0.74
USP46P62068 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms