Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 AC036111.1-201ENST00000533973 1582 ntBASIC17.94■□□□□ 0.46
VSX2P58304 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.94■□□□□ 0.46
VSX2P58304 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.93■□□□□ 0.46
VSX2P58304 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 AC009947.2-201ENST00000444014 672 ntBASIC17.93■□□□□ 0.46
VSX2P58304 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.93■□□□□ 0.46
VSX2P58304 AL049597.2-201ENST00000565575 961 ntBASIC17.93■□□□□ 0.46
VSX2P58304 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.93■□□□□ 0.46
VSX2P58304 AC006011.2-201ENST00000621313 1158 ntBASIC17.93■□□□□ 0.46
VSX2P58304 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
VSX2P58304 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.93■□□□□ 0.46
VSX2P58304 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VSX2P58304 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VSX2P58304 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.92■□□□□ 0.46
VSX2P58304 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.92■□□□□ 0.46
VSX2P58304 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.92■□□□□ 0.46
VSX2P58304 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 AK4P3-201ENST00000418260 669 ntBASIC17.92■□□□□ 0.46
VSX2P58304 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
VSX2P58304 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VSX2P58304 COX11P1-201ENST00000489116 835 ntBASIC17.92■□□□□ 0.46
VSX2P58304 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.92■□□□□ 0.46
VSX2P58304 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.92■□□□□ 0.46
VSX2P58304 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VSX2P58304 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.92■□□□□ 0.46
VSX2P58304 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX2P58304 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.91■□□□□ 0.46
VSX2P58304 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
VSX2P58304 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VSX2P58304 KRT8P32-201ENST00000512863 1461 ntBASIC17.91■□□□□ 0.46
VSX2P58304 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 AC117947.1-201ENST00000427448 529 ntBASIC17.91■□□□□ 0.46
VSX2P58304 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.91■□□□□ 0.46
VSX2P58304 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 MIR3180-5-201ENST00000583743 153 ntBASIC17.91■□□□□ 0.46
VSX2P58304 AC140113.3-201ENST00000605663 199 ntBASIC17.91■□□□□ 0.46
VSX2P58304 AC010331.1-201ENST00000611423 582 ntBASIC17.91■□□□□ 0.46
VSX2P58304 AL023973.1-201ENST00000624619 620 ntBASIC17.91■□□□□ 0.46
VSX2P58304 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms