Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SUMO3P55854 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.98■□□□□ 0.31
SUMO3P55854 HOXB1-202ENST00000577092 1414 ntBASIC16.97■□□□□ 0.31
SUMO3P55854 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.97■□□□□ 0.31
SUMO3P55854 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.97■□□□□ 0.31
SUMO3P55854 AC012306.2-201ENST00000609350 630 ntBASIC16.97■□□□□ 0.31
SUMO3P55854 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 AC133561.5-201ENST00000635547 218 ntBASIC16.97■□□□□ 0.31
SUMO3P55854 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SUMO3P55854 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUMO3P55854 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.97■□□□□ 0.31
SUMO3P55854 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.97■□□□□ 0.31
SUMO3P55854 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.96■□□□□ 0.31
SUMO3P55854 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.96■□□□□ 0.31
SUMO3P55854 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.96■□□□□ 0.31
SUMO3P55854 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SUMO3P55854 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.96■□□□□ 0.31
SUMO3P55854 AP000523.1-201ENST00000398242 1049 ntBASIC16.96■□□□□ 0.31
SUMO3P55854 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.96■□□□□ 0.31
SUMO3P55854 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
SUMO3P55854 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.96■□□□□ 0.31
SUMO3P55854 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.96■□□□□ 0.31
SUMO3P55854 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUMO3P55854 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
SUMO3P55854 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SUMO3P55854 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SUMO3P55854 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.95■□□□□ 0.3
SUMO3P55854 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 SLC25A3P1-201ENST00000443844 931 ntBASIC16.95■□□□□ 0.3
SUMO3P55854 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.95■□□□□ 0.3
SUMO3P55854 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.95■□□□□ 0.3
SUMO3P55854 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.95■□□□□ 0.3
SUMO3P55854 NEK4P2-201ENST00000580004 1012 ntBASIC16.95■□□□□ 0.3
SUMO3P55854 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.95■□□□□ 0.3
SUMO3P55854 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.95■□□□□ 0.3
SUMO3P55854 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUMO3P55854 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SUMO3P55854 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.94■□□□□ 0.3
SUMO3P55854 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUMO3P55854 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SUMO3P55854 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUMO3P55854 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SUMO3P55854 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUMO3P55854 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
SUMO3P55854 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.94■□□□□ 0.3
SUMO3P55854 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.94■□□□□ 0.3
SUMO3P55854 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.94■□□□□ 0.3
SUMO3P55854 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUMO3P55854 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.94■□□□□ 0.3
SUMO3P55854 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.94■□□□□ 0.3
SUMO3P55854 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SUMO3P55854 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUMO3P55854 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUMO3P55854 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.94■□□□□ 0.3
SUMO3P55854 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms