Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXG1P55316 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.44■□□□□ 0.22
FOXG1P55316 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
FOXG1P55316 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXG1P55316 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXG1P55316 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXG1P55316 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXG1P55316 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXG1P55316 AL049597.2-201ENST00000565575 961 ntBASIC16.43■□□□□ 0.22
FOXG1P55316 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 AL512604.3-201ENST00000569583 964 ntBASIC16.43■□□□□ 0.22
FOXG1P55316 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXG1P55316 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXG1P55316 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXG1P55316 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXG1P55316 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.43■□□□□ 0.22
FOXG1P55316 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.42■□□□□ 0.22
FOXG1P55316 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 MIR564-202ENST00000385049 94 ntBASIC16.42■□□□□ 0.22
FOXG1P55316 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
FOXG1P55316 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
FOXG1P55316 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.42■□□□□ 0.22
FOXG1P55316 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXG1P55316 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXG1P55316 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXG1P55316 GCSHP2-201ENST00000560971 527 ntBASIC16.42■□□□□ 0.22
FOXG1P55316 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.42■□□□□ 0.22
FOXG1P55316 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXG1P55316 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXG1P55316 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 AC024243.1-201ENST00000609234 778 ntBASIC16.42■□□□□ 0.22
FOXG1P55316 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
FOXG1P55316 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXG1P55316 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
FOXG1P55316 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXG1P55316 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXG1P55316 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXG1P55316 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXG1P55316 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXG1P55316 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXG1P55316 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXG1P55316 AC140113.3-201ENST00000605663 199 ntBASIC16.41■□□□□ 0.22
FOXG1P55316 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXG1P55316 AL499627.1-201ENST00000569373 2188 ntBASIC16.41■□□□□ 0.22
FOXG1P55316 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms