Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
VCPP55072 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.06■□□□□ 0.8
VCPP55072 CCR12P-201ENST00000446203 998 ntBASIC20.06■□□□□ 0.8
VCPP55072 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.06■□□□□ 0.8
VCPP55072 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VCPP55072 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
VCPP55072 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.06■□□□□ 0.8
VCPP55072 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VCPP55072 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VCPP55072 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VCPP55072 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.06■□□□□ 0.8
VCPP55072 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCPP55072 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.06■□□□□ 0.8
VCPP55072 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCPP55072 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VCPP55072 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.05■□□□□ 0.8
VCPP55072 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 AC141586.3-201ENST00000562166 1838 ntBASIC20.05■□□□□ 0.8
VCPP55072 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VCPP55072 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.05■□□□□ 0.8
VCPP55072 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
VCPP55072 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VCPP55072 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
VCPP55072 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.05■□□□□ 0.8
VCPP55072 AC007663.1-201ENST00000438948 1240 ntBASIC20.05■□□□□ 0.8
VCPP55072 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.05■□□□□ 0.8
VCPP55072 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.05■□□□□ 0.8
VCPP55072 VENTXP5-201ENST00000523979 775 ntBASIC20.05■□□□□ 0.8
VCPP55072 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.05■□□□□ 0.8
VCPP55072 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.05■□□□□ 0.8
VCPP55072 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.05■□□□□ 0.8
VCPP55072 AP000692.2-201ENST00000608391 879 ntBASIC20.05■□□□□ 0.8
VCPP55072 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.05■□□□□ 0.8
VCPP55072 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VCPP55072 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCPP55072 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCPP55072 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.04■□□□□ 0.8
VCPP55072 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 RCC2P6-201ENST00000526625 1557 ntBASIC20.04■□□□□ 0.8
VCPP55072 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCPP55072 AL161938.1-201ENST00000569833 2180 ntBASIC20.04■□□□□ 0.8
VCPP55072 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCPP55072 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCPP55072 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCPP55072 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.04■□□□□ 0.8
VCPP55072 KRT18P38-201ENST00000449496 1282 ntBASIC20.04■□□□□ 0.8
VCPP55072 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VCPP55072 AL441883.1-201ENST00000566170 1045 ntBASIC20.04■□□□□ 0.8
VCPP55072 AL023973.1-201ENST00000624619 620 ntBASIC20.04■□□□□ 0.8
VCPP55072 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VCPP55072 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VCPP55072 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.03■□□□□ 0.8
VCPP55072 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.03■□□□□ 0.8
VCPP55072 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 AC008040.2-201ENST00000461049 708 ntBASIC20.03■□□□□ 0.8
VCPP55072 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.03■□□□□ 0.8
VCPP55072 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.03■□□□□ 0.8
VCPP55072 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.03■□□□□ 0.8
VCPP55072 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
VCPP55072 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCPP55072 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms