Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHB4P54760 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.05■□□□□ 0.96
EPHB4P54760 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB4P54760 AL645929.1-201ENST00000420084 975 ntBASIC21.05■□□□□ 0.96
EPHB4P54760 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB4P54760 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB4P54760 AC092597.1-201ENST00000487352 616 ntBASIC21.05■□□□□ 0.96
EPHB4P54760 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB4P54760 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHB4P54760 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB4P54760 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHB4P54760 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB4P54760 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHB4P54760 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.04■□□□□ 0.96
EPHB4P54760 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
EPHB4P54760 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EPHB4P54760 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
EPHB4P54760 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EPHB4P54760 AP002383.4-201ENST00000442518 975 ntBASIC21.04■□□□□ 0.96
EPHB4P54760 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EPHB4P54760 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.04■□□□□ 0.96
EPHB4P54760 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EPHB4P54760 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.04■□□□□ 0.96
EPHB4P54760 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.04■□□□□ 0.96
EPHB4P54760 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
EPHB4P54760 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EPHB4P54760 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
EPHB4P54760 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHB4P54760 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHB4P54760 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHB4P54760 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHB4P54760 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.03■□□□□ 0.96
EPHB4P54760 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 AC016734.2-201ENST00000624325 1377 ntBASIC21.03■□□□□ 0.96
EPHB4P54760 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 AP000593.1-201ENST00000393668 712 ntBASIC21.03■□□□□ 0.96
EPHB4P54760 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHB4P54760 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.03■□□□□ 0.96
EPHB4P54760 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.03■□□□□ 0.96
EPHB4P54760 TSSC2-201ENST00000450217 709 ntBASIC21.03■□□□□ 0.96
EPHB4P54760 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHB4P54760 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.03■□□□□ 0.96
EPHB4P54760 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHB4P54760 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHB4P54760 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHB4P54760 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHB4P54760 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHB4P54760 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.02■□□□□ 0.96
EPHB4P54760 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHB4P54760 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.02■□□□□ 0.96
EPHB4P54760 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 AL022342.1-201ENST00000400363 863 ntBASIC21.02■□□□□ 0.96
EPHB4P54760 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHB4P54760 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
EPHB4P54760 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.02■□□□□ 0.96
EPHB4P54760 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHB4P54760 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.02■□□□□ 0.96
EPHB4P54760 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
EPHB4P54760 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHB4P54760 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.02■□□□□ 0.95
EPHB4P54760 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.02■□□□□ 0.95
EPHB4P54760 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms