Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLTCL1P53675 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.83■■□□□ 1.89
CLTCL1P53675 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLTCL1P53675 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CLTCL1P53675 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CLTCL1P53675 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC26.83■■□□□ 1.88
CLTCL1P53675 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
CLTCL1P53675 AKR1C7P-201ENST00000305623 895 ntBASIC26.83■■□□□ 1.88
CLTCL1P53675 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC26.83■■□□□ 1.88
CLTCL1P53675 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.88
CLTCL1P53675 AC009078.2-202ENST00000463353 338 ntBASIC26.83■■□□□ 1.88
CLTCL1P53675 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC26.83■■□□□ 1.88
CLTCL1P53675 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
CLTCL1P53675 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
CLTCL1P53675 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
CLTCL1P53675 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC26.83■■□□□ 1.88
CLTCL1P53675 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.83■■□□□ 1.88
CLTCL1P53675 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
CLTCL1P53675 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.88
CLTCL1P53675 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CLTCL1P53675 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC26.82■■□□□ 1.88
CLTCL1P53675 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC26.82■■□□□ 1.88
CLTCL1P53675 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.82■■□□□ 1.88
CLTCL1P53675 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CLTCL1P53675 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC26.82■■□□□ 1.88
CLTCL1P53675 AC104692.2-201ENST00000603054 253 ntBASIC26.82■■□□□ 1.88
CLTCL1P53675 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC26.82■■□□□ 1.88
CLTCL1P53675 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC26.82■■□□□ 1.88
CLTCL1P53675 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC26.82■■□□□ 1.88
CLTCL1P53675 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
CLTCL1P53675 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CLTCL1P53675 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.82■■□□□ 1.88
CLTCL1P53675 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CLTCL1P53675 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 FAAHP1-202ENST00000446499 1238 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC26.81■■□□□ 1.88
CLTCL1P53675 AC104819.1-201ENST00000504587 486 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC26.81■■□□□ 1.88
CLTCL1P53675 FOSL1P1-201ENST00000511041 816 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 SLC25A6P4-201ENST00000586535 553 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 AC005332.3-201ENST00000589904 676 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CLTCL1P53675 AL357033.4-201ENST00000617703 1807 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 KRT89P-201ENST00000620027 1478 ntBASIC26.81■■□□□ 1.88
CLTCL1P53675 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
CLTCL1P53675 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CLTCL1P53675 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC26.8■■□□□ 1.88
CLTCL1P53675 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC26.8■■□□□ 1.88
CLTCL1P53675 CDV3-207ENST00000508481 661 ntTSL 3 BASIC26.8■■□□□ 1.88
CLTCL1P53675 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC26.8■■□□□ 1.88
CLTCL1P53675 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLTCL1P53675 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC26.8■■□□□ 1.88
CLTCL1P53675 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLTCL1P53675 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLTCL1P53675 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC26.8■■□□□ 1.88
CLTCL1P53675 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CLTCL1P53675 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CLTCL1P53675 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLTCL1P53675 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC26.8■■□□□ 1.88
CLTCL1P53675 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CLTCL1P53675 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.79■■□□□ 1.88
CLTCL1P53675 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC26.79■■□□□ 1.88
CLTCL1P53675 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
CLTCL1P53675 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 AP000347.1-202ENST00000435868 847 ntBASIC26.79■■□□□ 1.88
CLTCL1P53675 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.79■■□□□ 1.88
CLTCL1P53675 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC26.79■■□□□ 1.88
CLTCL1P53675 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC26.79■■□□□ 1.88
CLTCL1P53675 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLTCL1P53675 KRT18P31-201ENST00000506277 1292 ntBASIC26.79■■□□□ 1.88
CLTCL1P53675 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC26.79■■□□□ 1.88
CLTCL1P53675 AC024563.2-201ENST00000603282 481 ntBASIC26.79■■□□□ 1.88
CLTCL1P53675 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC26.79■■□□□ 1.88
CLTCL1P53675 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC26.79■■□□□ 1.88
CLTCL1P53675 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
CLTCL1P53675 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CLTCL1P53675 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CLTCL1P53675 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.78■■□□□ 1.88
CLTCL1P53675 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLTCL1P53675 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC26.78■■□□□ 1.88
CLTCL1P53675 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms