Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A3P43003 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC1A3P43003 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A3P43003 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC1A3P43003 AL049637.2-201ENST00000641778 930 ntBASIC17.26■□□□□ 0.35
SLC1A3P43003 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC1A3P43003 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A3P43003 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A3P43003 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A3P43003 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SLC1A3P43003 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A3P43003 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC1A3P43003 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A3P43003 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A3P43003 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SLC1A3P43003 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC1A3P43003 AP006294.2-201ENST00000641667 209 ntBASIC17.25■□□□□ 0.35
SLC1A3P43003 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC1A3P43003 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A3P43003 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A3P43003 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A3P43003 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A3P43003 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A3P43003 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 MESTP1-201ENST00000404287 994 ntBASIC17.24■□□□□ 0.35
SLC1A3P43003 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A3P43003 AC116562.2-201ENST00000507042 360 ntBASIC17.24■□□□□ 0.35
SLC1A3P43003 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 NUDT16P1-203ENST00000513809 620 ntBASIC17.24■□□□□ 0.35
SLC1A3P43003 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A3P43003 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A3P43003 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A3P43003 CKBP1-201ENST00000565489 1086 ntBASIC17.24■□□□□ 0.35
SLC1A3P43003 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 AC113410.3-201ENST00000623366 203 ntBASIC17.24■□□□□ 0.35
SLC1A3P43003 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A3P43003 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 BICD1-207ENST00000551848 1962 ntBASIC17.24■□□□□ 0.35
SLC1A3P43003 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A3P43003 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A3P43003 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A3P43003 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A3P43003 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A3P43003 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms