Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.99■□□□□ 0.63
HADHAP40939 CKBP1-201ENST00000565489 1086 ntBASIC18.99■□□□□ 0.63
HADHAP40939 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.99■□□□□ 0.63
HADHAP40939 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
HADHAP40939 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.99■□□□□ 0.63
HADHAP40939 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.99■□□□□ 0.63
HADHAP40939 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.99■□□□□ 0.63
HADHAP40939 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.98■□□□□ 0.63
HADHAP40939 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.98■□□□□ 0.63
HADHAP40939 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
HADHAP40939 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.98■□□□□ 0.63
HADHAP40939 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.98■□□□□ 0.63
HADHAP40939 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HADHAP40939 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HADHAP40939 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
HADHAP40939 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.98■□□□□ 0.63
HADHAP40939 AP003071.4-201ENST00000562276 1284 ntBASIC18.98■□□□□ 0.63
HADHAP40939 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.98■□□□□ 0.63
HADHAP40939 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
HADHAP40939 REXO1L10P-201ENST00000615707 1290 ntBASIC18.98■□□□□ 0.63
HADHAP40939 REXO1L12P-201ENST00000622156 912 ntBASIC18.98■□□□□ 0.63
HADHAP40939 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
HADHAP40939 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HADHAP40939 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 AL596275.1-201ENST00000423464 877 ntBASIC18.97■□□□□ 0.63
HADHAP40939 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.97■□□□□ 0.63
HADHAP40939 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.97■□□□□ 0.63
HADHAP40939 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.97■□□□□ 0.63
HADHAP40939 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.97■□□□□ 0.63
HADHAP40939 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
HADHAP40939 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HADHAP40939 KRT17P2-201ENST00000300992 1314 ntBASIC18.97■□□□□ 0.63
HADHAP40939 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HADHAP40939 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HADHAP40939 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 BCL2-203ENST00000589955 5011 ntBASIC18.96■□□□□ 0.63
HADHAP40939 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.96■□□□□ 0.63
HADHAP40939 AC096733.2-201ENST00000609937 1394 ntBASIC18.96■□□□□ 0.63
HADHAP40939 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
HADHAP40939 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.96■□□□□ 0.63
HADHAP40939 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HADHAP40939 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.96■□□□□ 0.63
HADHAP40939 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.96■□□□□ 0.63
HADHAP40939 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.96■□□□□ 0.63
HADHAP40939 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.96■□□□□ 0.63
HADHAP40939 AC009113.1-201ENST00000570267 2443 ntBASIC18.96■□□□□ 0.63
HADHAP40939 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HADHAP40939 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms