Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.33■■□□□ 1.01
CLCN1P35523 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CLCN1P35523 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.33■■□□□ 1.01
CLCN1P35523 AC023632.3-201ENST00000521633 145 ntBASIC21.33■■□□□ 1.01
CLCN1P35523 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLCN1P35523 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CLCN1P35523 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLCN1P35523 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.32■■□□□ 1
CLCN1P35523 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.32■■□□□ 1
CLCN1P35523 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.32■■□□□ 1
CLCN1P35523 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.32■■□□□ 1
CLCN1P35523 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.32■■□□□ 1
CLCN1P35523 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.32■■□□□ 1
CLCN1P35523 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.32■■□□□ 1
CLCN1P35523 AC022211.2-201ENST00000585075 2527 ntBASIC21.32■■□□□ 1
CLCN1P35523 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.32■■□□□ 1
CLCN1P35523 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLCN1P35523 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.32■■□□□ 1
CLCN1P35523 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CLCN1P35523 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCN1P35523 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.31■■□□□ 1
CLCN1P35523 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.31■■□□□ 1
CLCN1P35523 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.31■■□□□ 1
CLCN1P35523 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CLCN1P35523 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.31■■□□□ 1
CLCN1P35523 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.31■■□□□ 1
CLCN1P35523 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.31■■□□□ 1
CLCN1P35523 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLCN1P35523 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN1P35523 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.31■■□□□ 1
CLCN1P35523 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLCN1P35523 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.3■■□□□ 1
CLCN1P35523 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CLCN1P35523 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.3■■□□□ 1
CLCN1P35523 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 DUSP5P2-201ENST00000426873 1033 ntBASIC21.3■■□□□ 1
CLCN1P35523 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.3■■□□□ 1
CLCN1P35523 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.3■■□□□ 1
CLCN1P35523 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.3■■□□□ 1
CLCN1P35523 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.3■■□□□ 1
CLCN1P35523 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CLCN1P35523 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CLCN1P35523 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.3■■□□□ 1
CLCN1P35523 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CLCN1P35523 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.3■■□□□ 1
CLCN1P35523 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN1P35523 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 KRT16P6-202ENST00000425692 1426 ntBASIC21.29■■□□□ 1
CLCN1P35523 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.29■■□□□ 1
CLCN1P35523 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.29■■□□□ 1
CLCN1P35523 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLCN1P35523 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.29■■□□□ 1
CLCN1P35523 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms