Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC24.54■■□□□ 1.52
RXRBP28702 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RXRBP28702 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RXRBP28702 AC104417.2-201ENST00000562989 1793 ntBASIC24.54■■□□□ 1.52
RXRBP28702 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RXRBP28702 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.54■■□□□ 1.52
RXRBP28702 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.54■■□□□ 1.52
RXRBP28702 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
RXRBP28702 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
RXRBP28702 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
RXRBP28702 METTL26-204ENST00000397665 558 ntTSL 2 BASIC24.53■■□□□ 1.52
RXRBP28702 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC24.53■■□□□ 1.52
RXRBP28702 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC24.53■■□□□ 1.52
RXRBP28702 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC24.53■■□□□ 1.52
RXRBP28702 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.53■■□□□ 1.52
RXRBP28702 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC24.53■■□□□ 1.52
RXRBP28702 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC24.53■■□□□ 1.52
RXRBP28702 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC24.53■■□□□ 1.52
RXRBP28702 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.53■■□□□ 1.52
RXRBP28702 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.53■■□□□ 1.52
RXRBP28702 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RXRBP28702 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.52■■□□□ 1.52
RXRBP28702 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
RXRBP28702 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.52■■□□□ 1.52
RXRBP28702 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 HLA-V-201ENST00000429037 534 ntBASIC24.52■■□□□ 1.52
RXRBP28702 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.52■■□□□ 1.52
RXRBP28702 C20orf181-201ENST00000623918 480 ntBASIC24.52■■□□□ 1.52
RXRBP28702 AC107918.4-202ENST00000641623 219 ntBASIC24.52■■□□□ 1.52
RXRBP28702 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RXRBP28702 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC24.52■■□□□ 1.52
RXRBP28702 AL109659.2-201ENST00000606809 1674 ntBASIC24.52■■□□□ 1.52
RXRBP28702 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RXRBP28702 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 INTS4P1-201ENST00000438455 1935 ntBASIC24.51■■□□□ 1.51
RXRBP28702 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 AC015922.1-201ENST00000421102 1152 ntBASIC24.51■■□□□ 1.51
RXRBP28702 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 PRSS29P-201ENST00000440800 595 ntBASIC24.51■■□□□ 1.51
RXRBP28702 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.51■■□□□ 1.51
RXRBP28702 KRT18P2-201ENST00000447938 1258 ntBASIC24.51■■□□□ 1.51
RXRBP28702 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.51■■□□□ 1.51
RXRBP28702 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC24.51■■□□□ 1.51
RXRBP28702 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
RXRBP28702 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.51■■□□□ 1.51
RXRBP28702 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RXRBP28702 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC24.5■■□□□ 1.51
RXRBP28702 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.5■■□□□ 1.51
RXRBP28702 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 ATP6V0CP3-201ENST00000417255 467 ntBASIC24.5■■□□□ 1.51
RXRBP28702 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.5■■□□□ 1.51
RXRBP28702 AC093512.1-201ENST00000617969 520 ntBASIC24.5■■□□□ 1.51
RXRBP28702 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
RXRBP28702 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 AC112777.1-201ENST00000540175 1423 ntBASIC24.5■■□□□ 1.51
RXRBP28702 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RXRBP28702 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.5■■□□□ 1.51
RXRBP28702 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.5■■□□□ 1.51
RXRBP28702 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RXRBP28702 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
RXRBP28702 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RXRBP28702 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RXRBP28702 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RXRBP28702 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RXRBP28702 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.49■■□□□ 1.51
RXRBP28702 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms