Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP24386 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP24386 HLA-A-209ENST00000638375 975 ntBASIC17.54■□□□□ 0.4
CHMP24386 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP24386 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP24386 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP24386 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP24386 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP24386 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP24386 AC020916.1-201ENST00000587762 1774 ntBASIC17.53■□□□□ 0.4
CHMP24386 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP24386 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP24386 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.53■□□□□ 0.4
CHMP24386 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 AC116562.2-201ENST00000507042 360 ntBASIC17.53■□□□□ 0.4
CHMP24386 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP24386 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CHMP24386 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHMP24386 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP24386 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP24386 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHMP24386 AL133373.2-201ENST00000623187 2828 ntBASIC17.53■□□□□ 0.4
CHMP24386 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 AL354751.1-201ENST00000412768 1863 ntBASIC17.52■□□□□ 0.4
CHMP24386 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP24386 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.52■□□□□ 0.4
CHMP24386 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP24386 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP24386 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 AC004980.1-204ENST00000429707 299 ntBASIC17.52■□□□□ 0.4
CHMP24386 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP24386 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.52■□□□□ 0.4
CHMP24386 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP24386 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHMP24386 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP24386 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.52■□□□□ 0.4
CHMP24386 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP24386 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.39
CHMP24386 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP24386 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.52■□□□□ 0.39
CHMP24386 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CHMP24386 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.52■□□□□ 0.39
CHMP24386 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CHMP24386 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms