Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 AL591424.1-201ENST00000442569 1213 ntBASIC18.34■□□□□ 0.53
SDHBP21912 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.34■□□□□ 0.53
SDHBP21912 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 GUSBP12-201ENST00000513727 720 ntBASIC18.34■□□□□ 0.53
SDHBP21912 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SDHBP21912 FAM197Y3-203ENST00000618346 717 ntBASIC18.34■□□□□ 0.53
SDHBP21912 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SDHBP21912 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SDHBP21912 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.34■□□□□ 0.53
SDHBP21912 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.34■□□□□ 0.53
SDHBP21912 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SDHBP21912 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHBP21912 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.33■□□□□ 0.53
SDHBP21912 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SDHBP21912 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHBP21912 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHBP21912 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.33■□□□□ 0.53
SDHBP21912 AC243591.1-201ENST00000452967 1364 ntBASIC18.33■□□□□ 0.53
SDHBP21912 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SDHBP21912 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SDHBP21912 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 AC004967.1-201ENST00000453589 447 ntBASIC18.33■□□□□ 0.52
SDHBP21912 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.33■□□□□ 0.52
SDHBP21912 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.33■□□□□ 0.52
SDHBP21912 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 AL390719.2-201ENST00000606993 987 ntBASIC18.33■□□□□ 0.52
SDHBP21912 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHBP21912 AL157888.1-201ENST00000631930 593 ntBASIC18.33■□□□□ 0.52
SDHBP21912 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHBP21912 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHBP21912 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.32■□□□□ 0.52
SDHBP21912 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.32■□□□□ 0.52
SDHBP21912 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 RPSAP43-201ENST00000402237 625 ntBASIC18.32■□□□□ 0.52
SDHBP21912 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 NUS1P2-201ENST00000417358 873 ntBASIC18.32■□□□□ 0.52
SDHBP21912 RPS8P6-201ENST00000426177 609 ntBASIC18.32■□□□□ 0.52
SDHBP21912 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SDHBP21912 SEC1P-202ENST00000473944 940 ntBASIC18.32■□□□□ 0.52
SDHBP21912 AP003733.1-201ENST00000491725 852 ntBASIC18.32■□□□□ 0.52
SDHBP21912 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.32■□□□□ 0.52
SDHBP21912 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.32■□□□□ 0.52
SDHBP21912 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.32■□□□□ 0.52
SDHBP21912 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SDHBP21912 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.32■□□□□ 0.52
SDHBP21912 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.32■□□□□ 0.52
SDHBP21912 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.32■□□□□ 0.52
SDHBP21912 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SDHBP21912 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHBP21912 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.31■□□□□ 0.52
SDHBP21912 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SDHBP21912 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SDHBP21912 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SDHBP21912 GPX1P2-201ENST00000429271 606 ntBASIC18.31■□□□□ 0.52
SDHBP21912 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.31■□□□□ 0.52
SDHBP21912 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
SDHBP21912 AC005332.3-201ENST00000589904 676 ntBASIC18.31■□□□□ 0.52
SDHBP21912 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHBP21912 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms