Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.06■□□□□ 0.48
CAPN3P20807 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN3P20807 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CAPN3P20807 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
CAPN3P20807 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 BX088651.1-201ENST00000540551 451 ntBASIC18.05■□□□□ 0.48
CAPN3P20807 SOX15-203ENST00000570788 1093 ntBASIC18.05■□□□□ 0.48
CAPN3P20807 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN3P20807 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.05■□□□□ 0.48
CAPN3P20807 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN3P20807 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
CAPN3P20807 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN3P20807 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN3P20807 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN3P20807 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CAPN3P20807 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 AL499627.1-201ENST00000569373 2188 ntBASIC18.04■□□□□ 0.48
CAPN3P20807 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN3P20807 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CAPN3P20807 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.04■□□□□ 0.48
CAPN3P20807 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CAPN3P20807 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 AL162741.1-201ENST00000565563 1558 ntBASIC18.04■□□□□ 0.48
CAPN3P20807 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CAPN3P20807 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN3P20807 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CAPN3P20807 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPN3P20807 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CAPN3P20807 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CAPN3P20807 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 HEIH-201ENST00000623091 1652 ntBASIC18.03■□□□□ 0.48
CAPN3P20807 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPN3P20807 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPN3P20807 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 AL160286.2-201ENST00000567150 934 ntBASIC18.03■□□□□ 0.48
CAPN3P20807 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.03■□□□□ 0.48
CAPN3P20807 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CAPN3P20807 HLA-A-209ENST00000638375 975 ntBASIC18.03■□□□□ 0.48
CAPN3P20807 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN3P20807 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CAPN3P20807 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms