Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
KRT3P12035 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.77■□□□□ 0.75
KRT3P12035 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT3P12035 KRT17P2-201ENST00000300992 1314 ntBASIC19.76■□□□□ 0.75
KRT3P12035 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT3P12035 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KRT3P12035 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT3P12035 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT3P12035 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT3P12035 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT3P12035 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT3P12035 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KRT3P12035 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
KRT3P12035 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KRT3P12035 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.76■□□□□ 0.75
KRT3P12035 AP005242.2-201ENST00000580065 1175 ntBASIC19.76■□□□□ 0.75
KRT3P12035 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT3P12035 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT3P12035 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT3P12035 MTMR9LP-203ENST00000426597 1545 ntBASIC19.76■□□□□ 0.75
KRT3P12035 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT3P12035 WIZP1-201ENST00000531444 2299 ntBASIC19.76■□□□□ 0.75
KRT3P12035 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT3P12035 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT3P12035 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT3P12035 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT3P12035 CA15P1-201ENST00000481698 905 ntBASIC19.75■□□□□ 0.75
KRT3P12035 MIR4497-201ENST00000583208 89 ntBASIC19.75■□□□□ 0.75
KRT3P12035 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT3P12035 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KRT3P12035 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
KRT3P12035 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.75■□□□□ 0.75
KRT3P12035 RCC2P3-201ENST00000418112 1537 ntBASIC19.75■□□□□ 0.75
KRT3P12035 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT3P12035 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT3P12035 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT3P12035 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
KRT3P12035 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT3P12035 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
KRT3P12035 AC008622.2-201ENST00000617006 1229 ntBASIC19.74■□□□□ 0.75
KRT3P12035 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT3P12035 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT3P12035 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT3P12035 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT3P12035 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
KRT3P12035 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 AC079598.2-202ENST00000546624 1451 ntBASIC19.73■□□□□ 0.75
KRT3P12035 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms