Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 KRT18P48-201ENST00000434763 852 ntBASIC20.56■□□□□ 0.88
COL1A2P08123 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.56■□□□□ 0.88
COL1A2P08123 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.56■□□□□ 0.88
COL1A2P08123 BX276092.5-203ENST00000456199 560 ntBASIC20.56■□□□□ 0.88
COL1A2P08123 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.56■□□□□ 0.88
COL1A2P08123 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.56■□□□□ 0.88
COL1A2P08123 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.56■□□□□ 0.88
COL1A2P08123 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COL1A2P08123 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
COL1A2P08123 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
COL1A2P08123 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.55■□□□□ 0.88
COL1A2P08123 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.55■□□□□ 0.88
COL1A2P08123 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.55■□□□□ 0.88
COL1A2P08123 KRT8P26-201ENST00000534154 1276 ntBASIC20.55■□□□□ 0.88
COL1A2P08123 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.55■□□□□ 0.88
COL1A2P08123 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.55■□□□□ 0.88
COL1A2P08123 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A2P08123 AC005332.7-201ENST00000614046 2005 ntBASIC20.55■□□□□ 0.88
COL1A2P08123 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A2P08123 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A2P08123 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A2P08123 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 KRT8P50-201ENST00000562022 1438 ntBASIC20.54■□□□□ 0.88
COL1A2P08123 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL1A2P08123 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A2P08123 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL1A2P08123 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A2P08123 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 TSSC2-201ENST00000450217 709 ntBASIC20.54■□□□□ 0.88
COL1A2P08123 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.54■□□□□ 0.88
COL1A2P08123 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.54■□□□□ 0.88
COL1A2P08123 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
COL1A2P08123 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A2P08123 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
COL1A2P08123 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A2P08123 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL1A2P08123 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A2P08123 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.53■□□□□ 0.88
COL1A2P08123 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COL1A2P08123 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL1A2P08123 AC016734.2-201ENST00000624325 1377 ntBASIC20.53■□□□□ 0.88
COL1A2P08123 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.53■□□□□ 0.88
COL1A2P08123 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
COL1A2P08123 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.53■□□□□ 0.88
COL1A2P08123 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.53■□□□□ 0.88
COL1A2P08123 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL1A2P08123 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL1A2P08123 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL1A2P08123 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL1A2P08123 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL1A2P08123 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL1A2P08123 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.52■□□□□ 0.88
COL1A2P08123 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.52■□□□□ 0.88
COL1A2P08123 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL1A2P08123 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.52■□□□□ 0.88
COL1A2P08123 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.52■□□□□ 0.88
COL1A2P08123 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.52■□□□□ 0.88
COL1A2P08123 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL1A2P08123 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.52■□□□□ 0.88
COL1A2P08123 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL1A2P08123 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
COL1A2P08123 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
COL1A2P08123 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
COL1A2P08123 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.52■□□□□ 0.87
COL1A2P08123 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL1A2P08123 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
COL1A2P08123 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.51■□□□□ 0.87
COL1A2P08123 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.51■□□□□ 0.87
COL1A2P08123 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.51■□□□□ 0.87
COL1A2P08123 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.51■□□□□ 0.87
COL1A2P08123 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms