Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
KRT6AP02538 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
KRT6AP02538 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT6AP02538 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KRT6AP02538 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT6AP02538 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT6AP02538 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT6AP02538 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 KRT8P3-201ENST00000519669 1449 ntBASIC18.18■□□□□ 0.5
KRT6AP02538 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KRT6AP02538 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 RARRES2P10-201ENST00000564312 460 ntBASIC18.18■□□□□ 0.5
KRT6AP02538 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KRT6AP02538 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.18■□□□□ 0.5
KRT6AP02538 CR392000.1-201ENST00000624770 1228 ntBASIC18.18■□□□□ 0.5
KRT6AP02538 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 AC079598.2-202ENST00000546624 1451 ntBASIC18.18■□□□□ 0.5
KRT6AP02538 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KRT6AP02538 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT6AP02538 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KRT6AP02538 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KRT6AP02538 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT6AP02538 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KRT6AP02538 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT6AP02538 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.17■□□□□ 0.5
KRT6AP02538 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.17■□□□□ 0.5
KRT6AP02538 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 AC073195.1-201ENST00000607241 877 ntBASIC18.17■□□□□ 0.5
KRT6AP02538 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.17■□□□□ 0.5
KRT6AP02538 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT6AP02538 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT6AP02538 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT6AP02538 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
KRT6AP02538 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.16■□□□□ 0.5
KRT6AP02538 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT6AP02538 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 FAM201B-201ENST00000458407 597 ntBASIC18.16■□□□□ 0.5
KRT6AP02538 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT6AP02538 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
KRT6AP02538 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 AF186192.3-201ENST00000583427 947 ntBASIC18.16■□□□□ 0.5
KRT6AP02538 AC011298.2-201ENST00000617989 482 ntBASIC18.16■□□□□ 0.5
KRT6AP02538 FAM197Y4-202ENST00000622692 608 ntBASIC18.16■□□□□ 0.5
KRT6AP02538 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms