Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC4O75487 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC4O75487 AL049812.1-201ENST00000432563 2267 ntBASIC18.8■□□□□ 0.6
GPC4O75487 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GPC4O75487 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 TSPY21P-201ENST00000433481 731 ntBASIC18.8■□□□□ 0.6
GPC4O75487 AC011506.1-201ENST00000474329 610 ntBASIC18.8■□□□□ 0.6
GPC4O75487 AC091390.4-202ENST00000476426 537 ntBASIC18.8■□□□□ 0.6
GPC4O75487 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.8■□□□□ 0.6
GPC4O75487 AC116562.2-201ENST00000507042 360 ntBASIC18.8■□□□□ 0.6
GPC4O75487 NUDT16P1-203ENST00000513809 620 ntBASIC18.8■□□□□ 0.6
GPC4O75487 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC4O75487 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC4O75487 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.8■□□□□ 0.6
GPC4O75487 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.8■□□□□ 0.6
GPC4O75487 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
GPC4O75487 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
GPC4O75487 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GPC4O75487 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GPC4O75487 AC006333.2-201ENST00000607957 2099 ntBASIC18.8■□□□□ 0.6
GPC4O75487 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC4O75487 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
GPC4O75487 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 AC004951.3-201ENST00000418645 1148 ntBASIC18.79■□□□□ 0.6
GPC4O75487 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.79■□□□□ 0.6
GPC4O75487 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.79■□□□□ 0.6
GPC4O75487 AC008040.2-201ENST00000461049 708 ntBASIC18.79■□□□□ 0.6
GPC4O75487 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 MIR6786-201ENST00000616843 113 ntBASIC18.79■□□□□ 0.6
GPC4O75487 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GPC4O75487 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC4O75487 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GPC4O75487 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC4O75487 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC4O75487 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 FSCN1P1-201ENST00000568912 1481 ntBASIC18.78■□□□□ 0.6
GPC4O75487 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC4O75487 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.78■□□□□ 0.6
GPC4O75487 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 TSPY23P-201ENST00000440136 739 ntBASIC18.78■□□□□ 0.6
GPC4O75487 B3GAT3P1-201ENST00000471720 806 ntBASIC18.78■□□□□ 0.6
GPC4O75487 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.78■□□□□ 0.6
GPC4O75487 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.78■□□□□ 0.6
GPC4O75487 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC4O75487 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC4O75487 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC4O75487 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms