Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
SMAD9O15198 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SMAD9O15198 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.03■□□□□ 0.32
SMAD9O15198 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.03■□□□□ 0.32
SMAD9O15198 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.03■□□□□ 0.32
SMAD9O15198 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 MMP23A-201ENST00000234610 1017 ntBASIC17.03■□□□□ 0.32
SMAD9O15198 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.03■□□□□ 0.32
SMAD9O15198 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.03■□□□□ 0.32
SMAD9O15198 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.03■□□□□ 0.32
SMAD9O15198 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.03■□□□□ 0.32
SMAD9O15198 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.03■□□□□ 0.32
SMAD9O15198 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
SMAD9O15198 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 KRT8P9-201ENST00000558927 1449 ntBASIC17.03■□□□□ 0.32
SMAD9O15198 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD9O15198 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.03■□□□□ 0.32
SMAD9O15198 IRX1P1-201ENST00000438849 1838 ntBASIC17.03■□□□□ 0.32
SMAD9O15198 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.02■□□□□ 0.32
SMAD9O15198 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMAD9O15198 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SMAD9O15198 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD9O15198 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SMAD9O15198 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD9O15198 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.02■□□□□ 0.32
SMAD9O15198 AC073912.3-201ENST00000624414 853 ntBASIC17.02■□□□□ 0.32
SMAD9O15198 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.02■□□□□ 0.32
SMAD9O15198 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD9O15198 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD9O15198 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
SMAD9O15198 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD9O15198 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD9O15198 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SMAD9O15198 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.02■□□□□ 0.31
SMAD9O15198 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.02■□□□□ 0.31
SMAD9O15198 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.02■□□□□ 0.31
SMAD9O15198 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 AC007613.1-201ENST00000572811 2597 ntBASIC17.01■□□□□ 0.31
SMAD9O15198 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.01■□□□□ 0.31
SMAD9O15198 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.01■□□□□ 0.31
SMAD9O15198 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.01■□□□□ 0.31
SMAD9O15198 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.01■□□□□ 0.31
SMAD9O15198 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SMAD9O15198 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMAD9O15198 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SMAD9O15198 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD9O15198 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms