Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDN4O14493 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN4O14493 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN4O14493 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN4O14493 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDN4O14493 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN4O14493 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 AL137013.1-201ENST00000432946 1228 ntBASIC17.67■□□□□ 0.42
CLDN4O14493 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN4O14493 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN4O14493 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN4O14493 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN4O14493 AC083906.6-201ENST00000641366 219 ntBASIC17.67■□□□□ 0.42
CLDN4O14493 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN4O14493 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN4O14493 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN4O14493 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN4O14493 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN4O14493 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN4O14493 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN4O14493 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN4O14493 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN4O14493 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN4O14493 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN4O14493 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN4O14493 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN4O14493 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN4O14493 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN4O14493 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN4O14493 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN4O14493 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN4O14493 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CLDN4O14493 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLDN4O14493 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
CLDN4O14493 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLDN4O14493 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 AC113347.1-201ENST00000413321 391 ntBASIC17.65■□□□□ 0.42
CLDN4O14493 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN4O14493 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CLDN4O14493 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN4O14493 MIR3180-5-201ENST00000583743 153 ntBASIC17.65■□□□□ 0.42
CLDN4O14493 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLDN4O14493 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN4O14493 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN4O14493 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
CLDN4O14493 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN4O14493 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.64■□□□□ 0.42
CLDN4O14493 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms