Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 AL355472.2-201ENST00000422958 438 ntBASIC13.25□□□□□ -0.29
LINC01546A6NGU7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 KRT8P32-201ENST00000512863 1461 ntBASIC13.24□□□□□ -0.29
LINC01546A6NGU7 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.24□□□□□ -0.29
LINC01546A6NGU7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 GPX1P1-201ENST00000388829 606 ntBASIC13.24□□□□□ -0.29
LINC01546A6NGU7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01546A6NGU7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 AC068338.2-201ENST00000563278 1430 ntBASIC13.23□□□□□ -0.29
LINC01546A6NGU7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 KRT18P14-201ENST00000534205 1250 ntBASIC13.23□□□□□ -0.29
LINC01546A6NGU7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms