Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 KRT8P3-201ENST00000519669 1449 ntBASIC17.89■□□□□ 0.45
CNOT1A5YKK6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 AL353692.3-201ENST00000407031 1396 ntBASIC17.89■□□□□ 0.45
CNOT1A5YKK6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AP005212.1-201ENST00000581547 1997 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 RFPL4AP1-201ENST00000530883 850 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AC239800.4-201ENST00000603712 296 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AC114341.1-201ENST00000618070 349 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AC002347.1-201ENST00000569543 541 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 AL596442.2-201ENST00000610240 980 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 IGHV3-41-201ENST00000613121 348 ntBASIC17.88■□□□□ 0.45
CNOT1A5YKK6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT1A5YKK6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 MIR5100-201ENST00000579544 119 ntBASIC17.87■□□□□ 0.45
CNOT1A5YKK6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 KRT8P7-201ENST00000533003 1432 ntBASIC17.87■□□□□ 0.45
CNOT1A5YKK6 AP005117.1-201ENST00000584346 1413 ntBASIC17.87■□□□□ 0.45
CNOT1A5YKK6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 AP006288.1-201ENST00000446065 395 ntBASIC17.87■□□□□ 0.45
CNOT1A5YKK6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 AP001269.4-201ENST00000609611 512 ntBASIC17.87■□□□□ 0.45
CNOT1A5YKK6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT1A5YKK6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 AC092364.2-202ENST00000597012 1073 ntBASIC17.86■□□□□ 0.45
CNOT1A5YKK6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 SDHAP1-207ENST00000440850 2000 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms