Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC25.4■■□□□ 1.66
SBNO1A3KN83 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC25.4■■□□□ 1.66
SBNO1A3KN83 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SBNO1A3KN83 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.4■■□□□ 1.66
SBNO1A3KN83 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.4■■□□□ 1.66
SBNO1A3KN83 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.39■■□□□ 1.66
SBNO1A3KN83 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC25.39■■□□□ 1.66
SBNO1A3KN83 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SBNO1A3KN83 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SBNO1A3KN83 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SBNO1A3KN83 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC25.39■■□□□ 1.66
SBNO1A3KN83 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SBNO1A3KN83 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SBNO1A3KN83 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SBNO1A3KN83 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SBNO1A3KN83 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
SBNO1A3KN83 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SBNO1A3KN83 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 KRT18P67-201ENST00000432816 1264 ntBASIC25.38■■□□□ 1.65
SBNO1A3KN83 PPOX-214ENST00000535223 664 ntTSL 3 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 ABR-217ENST00000572441 563 ntTSL 4 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 KRT89P-201ENST00000620027 1478 ntBASIC25.38■■□□□ 1.65
SBNO1A3KN83 PWWP2AP1-201ENST00000429776 2273 ntBASIC25.38■■□□□ 1.65
SBNO1A3KN83 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.38■■□□□ 1.65
SBNO1A3KN83 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SBNO1A3KN83 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 KRT18P58-201ENST00000527480 1120 ntBASIC25.37■■□□□ 1.65
SBNO1A3KN83 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC25.37■■□□□ 1.65
SBNO1A3KN83 AC024563.2-201ENST00000603282 481 ntBASIC25.37■■□□□ 1.65
SBNO1A3KN83 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC25.37■■□□□ 1.65
SBNO1A3KN83 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SBNO1A3KN83 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC25.37■■□□□ 1.65
SBNO1A3KN83 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SBNO1A3KN83 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SBNO1A3KN83 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 MOK-208ENST00000519058 917 ntTSL 2 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SBNO1A3KN83 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.36■■□□□ 1.65
SBNO1A3KN83 TEX21P-204ENST00000641479 1693 ntBASIC25.36■■□□□ 1.65
SBNO1A3KN83 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SBNO1A3KN83 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SBNO1A3KN83 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SBNO1A3KN83 AC125437.2-201ENST00000625180 2167 ntBASIC25.36■■□□□ 1.65
SBNO1A3KN83 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC25.36■■□□□ 1.65
SBNO1A3KN83 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SBNO1A3KN83 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 AL031284.1-201ENST00000419297 478 ntBASIC25.35■■□□□ 1.65
SBNO1A3KN83 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC25.35■■□□□ 1.65
SBNO1A3KN83 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC25.35■■□□□ 1.65
SBNO1A3KN83 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC25.35■■□□□ 1.65
SBNO1A3KN83 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SBNO1A3KN83 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC25.35■■□□□ 1.65
SBNO1A3KN83 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.35■■□□□ 1.65
SBNO1A3KN83 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms