Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 KRT18P38-201ENST00000449496 1282 ntBASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 FAM86EP-206ENST00000510506 987 ntBASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 ZNF444P1-201ENST00000559497 298 ntBASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 AL020996.1-203ENST00000536896 2307 ntBASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV10A0A0B4J240 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 AL136038.3-201ENST00000561909 1096 ntBASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV10A0A0B4J240 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 RASA4DP-201ENST00000460726 1199 ntBASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 AC024243.1-201ENST00000609234 778 ntBASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 AC112497.1-201ENST00000624824 639 ntBASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV10A0A0B4J240 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms