Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC007613.1-201ENST00000572811 2597 ntBASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.59■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.58■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TSPY15P-201ENST00000457163 923 ntBASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 GPAT2P1-201ENST00000444924 1672 ntBASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AL023284.2-201ENST00000405850 579 ntBASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AL390955.1-201ENST00000428694 934 ntBASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AL355075.4-201ENST00000554988 638 ntBASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 MIR4785-201ENST00000585005 73 ntBASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AP000525.1-201ENST00000608286 694 ntBASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AP005242.2-201ENST00000580065 1175 ntBASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 MIR4674-201ENST00000582457 87 ntBASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AP006294.2-201ENST00000641667 209 ntBASIC16.56■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms