Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
NINLQ9Y2I6 ABHD17AP5-201ENST00000580133 923 ntBASIC34.87■■■■□ 3.17
NINLQ9Y2I6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
NINLQ9Y2I6 ABCB10P3-201ENST00000561950 2166 ntBASIC34.86■■■■□ 3.17
NINLQ9Y2I6 ABCB10P1-201ENST00000614297 2181 ntBASIC34.86■■■■□ 3.17
NINLQ9Y2I6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
NINLQ9Y2I6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
NINLQ9Y2I6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.83■■■■□ 3.17
NINLQ9Y2I6 AC092296.2-201ENST00000589470 999 ntBASIC34.83■■■■□ 3.17
NINLQ9Y2I6 AP002414.2-202ENST00000590929 1450 ntBASIC34.82■■■■□ 3.16
NINLQ9Y2I6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
NINLQ9Y2I6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC34.81■■■■□ 3.16
NINLQ9Y2I6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC34.8■■■■□ 3.16
NINLQ9Y2I6 MED25-210ENST00000612854 801 ntTSL 5 BASIC34.8■■■■□ 3.16
NINLQ9Y2I6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
NINLQ9Y2I6 MED25-214ENST00000622402 642 ntTSL 5 BASIC34.8■■■■□ 3.16
NINLQ9Y2I6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC34.8■■■■□ 3.16
NINLQ9Y2I6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
NINLQ9Y2I6 AC126177.7-201ENST00000547904 679 ntBASIC34.79■■■■□ 3.16
NINLQ9Y2I6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
NINLQ9Y2I6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC34.79■■■■□ 3.16
NINLQ9Y2I6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
NINLQ9Y2I6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC34.79■■■■□ 3.16
NINLQ9Y2I6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
NINLQ9Y2I6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC34.78■■■■□ 3.16
NINLQ9Y2I6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC34.78■■■■□ 3.16
NINLQ9Y2I6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
NINLQ9Y2I6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC34.76■■■■□ 3.16
NINLQ9Y2I6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
NINLQ9Y2I6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC34.76■■■■□ 3.16
NINLQ9Y2I6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
NINLQ9Y2I6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
NINLQ9Y2I6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
NINLQ9Y2I6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC34.75■■■■□ 3.15
NINLQ9Y2I6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC34.75■■■■□ 3.15
NINLQ9Y2I6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC34.75■■■■□ 3.15
NINLQ9Y2I6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
NINLQ9Y2I6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
NINLQ9Y2I6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC34.72■■■■□ 3.15
NINLQ9Y2I6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
NINLQ9Y2I6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
NINLQ9Y2I6 AL157400.5-201ENST00000507624 621 ntBASIC34.71■■■■□ 3.15
NINLQ9Y2I6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
NINLQ9Y2I6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
NINLQ9Y2I6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
NINLQ9Y2I6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
NINLQ9Y2I6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
NINLQ9Y2I6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC34.68■■■■□ 3.14
NINLQ9Y2I6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
NINLQ9Y2I6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
NINLQ9Y2I6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
NINLQ9Y2I6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
NINLQ9Y2I6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC34.68■■■■□ 3.14
NINLQ9Y2I6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
NINLQ9Y2I6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC34.67■■■■□ 3.14
NINLQ9Y2I6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
NINLQ9Y2I6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
NINLQ9Y2I6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC34.66■■■■□ 3.14
NINLQ9Y2I6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC34.66■■■■□ 3.14
NINLQ9Y2I6 AC018358.1-201ENST00000631079 1402 ntBASIC34.66■■■■□ 3.14
NINLQ9Y2I6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
NINLQ9Y2I6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NINLQ9Y2I6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC34.64■■■■□ 3.14
NINLQ9Y2I6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
NINLQ9Y2I6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC34.64■■■■□ 3.14
NINLQ9Y2I6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
NINLQ9Y2I6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
NINLQ9Y2I6 ECEL1P2-201ENST00000461596 1295 ntBASIC34.63■■■■□ 3.13
NINLQ9Y2I6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC34.63■■■■□ 3.13
NINLQ9Y2I6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
NINLQ9Y2I6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
NINLQ9Y2I6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
NINLQ9Y2I6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
NINLQ9Y2I6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
NINLQ9Y2I6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC34.61■■■■□ 3.13
NINLQ9Y2I6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.61■■■■□ 3.13
NINLQ9Y2I6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
NINLQ9Y2I6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC34.6■■■■□ 3.13
NINLQ9Y2I6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
NINLQ9Y2I6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
NINLQ9Y2I6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NINLQ9Y2I6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
NINLQ9Y2I6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
NINLQ9Y2I6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
NINLQ9Y2I6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.56■■■■□ 3.12
NINLQ9Y2I6 NTF6A-201ENST00000591175 560 ntBASIC34.56■■■■□ 3.12
NINLQ9Y2I6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
NINLQ9Y2I6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
NINLQ9Y2I6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
NINLQ9Y2I6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC34.54■■■■□ 3.12
NINLQ9Y2I6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
NINLQ9Y2I6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
NINLQ9Y2I6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
NINLQ9Y2I6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
NINLQ9Y2I6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC34.53■■■■□ 3.12
NINLQ9Y2I6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
NINLQ9Y2I6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NINLQ9Y2I6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC34.52■■■■□ 3.12
NINLQ9Y2I6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NINLQ9Y2I6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms