Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
NEUROD4Q9HD90 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NEUROD4Q9HD90 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NEUROD4Q9HD90 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NEUROD4Q9HD90 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
NEUROD4Q9HD90 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NEUROD4Q9HD90 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEUROD4Q9HD90 DUX4L29-201ENST00000425409 679 ntBASIC23.68■■□□□ 1.38
NEUROD4Q9HD90 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
NEUROD4Q9HD90 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 HLA-V-202ENST00000446817 847 ntBASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 AC021231.2-201ENST00000594613 730 ntBASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NEUROD4Q9HD90 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEUROD4Q9HD90 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEUROD4Q9HD90 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEUROD4Q9HD90 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEUROD4Q9HD90 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
NEUROD4Q9HD90 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.65■■□□□ 1.38
NEUROD4Q9HD90 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NEUROD4Q9HD90 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
NEUROD4Q9HD90 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NEUROD4Q9HD90 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NEUROD4Q9HD90 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.63■■□□□ 1.37
NEUROD4Q9HD90 AC110285.7-201ENST00000624417 1536 ntBASIC23.63■■□□□ 1.37
NEUROD4Q9HD90 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEUROD4Q9HD90 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NEUROD4Q9HD90 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEUROD4Q9HD90 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.62■■□□□ 1.37
NEUROD4Q9HD90 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEUROD4Q9HD90 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEUROD4Q9HD90 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NEUROD4Q9HD90 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NEUROD4Q9HD90 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.61■■□□□ 1.37
NEUROD4Q9HD90 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.61■■□□□ 1.37
NEUROD4Q9HD90 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
NEUROD4Q9HD90 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NEUROD4Q9HD90 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NEUROD4Q9HD90 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.59■■□□□ 1.37
NEUROD4Q9HD90 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NEUROD4Q9HD90 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.59■■□□□ 1.37
NEUROD4Q9HD90 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.58■■□□□ 1.37
NEUROD4Q9HD90 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.58■■□□□ 1.36
NEUROD4Q9HD90 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NEUROD4Q9HD90 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEUROD4Q9HD90 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
NEUROD4Q9HD90 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
NEUROD4Q9HD90 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.57■■□□□ 1.36
NEUROD4Q9HD90 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.56■■□□□ 1.36
NEUROD4Q9HD90 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.56■■□□□ 1.36
NEUROD4Q9HD90 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEUROD4Q9HD90 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.55■■□□□ 1.36
NEUROD4Q9HD90 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.55■■□□□ 1.36
NEUROD4Q9HD90 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NEUROD4Q9HD90 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.53■■□□□ 1.36
NEUROD4Q9HD90 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NEUROD4Q9HD90 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEUROD4Q9HD90 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEUROD4Q9HD90 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEUROD4Q9HD90 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.52■■□□□ 1.36
NEUROD4Q9HD90 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
NEUROD4Q9HD90 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NEUROD4Q9HD90 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.52■■□□□ 1.36
NEUROD4Q9HD90 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.51■■□□□ 1.35
NEUROD4Q9HD90 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.51■■□□□ 1.35
NEUROD4Q9HD90 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.51■■□□□ 1.35
NEUROD4Q9HD90 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.51■■□□□ 1.35
NEUROD4Q9HD90 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.51■■□□□ 1.35
NEUROD4Q9HD90 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.51■■□□□ 1.35
NEUROD4Q9HD90 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NEUROD4Q9HD90 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NEUROD4Q9HD90 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.5■■□□□ 1.35
NEUROD4Q9HD90 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NEUROD4Q9HD90 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.5■■□□□ 1.35
NEUROD4Q9HD90 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 LINC01971-201ENST00000617888 1048 ntBASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms