Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDK5RAP1Q96SZ6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CDK5RAP1Q96SZ6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CDK5RAP1Q96SZ6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDK5RAP1Q96SZ6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDK5RAP1Q96SZ6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP1Q96SZ6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP1Q96SZ6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP1Q96SZ6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP1Q96SZ6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
CDK5RAP1Q96SZ6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CDK5RAP1Q96SZ6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP1Q96SZ6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP1Q96SZ6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDK5RAP1Q96SZ6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDK5RAP1Q96SZ6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.26■■□□□ 1.79
CDK5RAP1Q96SZ6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.26■■□□□ 1.79
CDK5RAP1Q96SZ6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDK5RAP1Q96SZ6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 AC126177.7-201ENST00000547904 679 ntBASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP1Q96SZ6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.24■■□□□ 1.79
CDK5RAP1Q96SZ6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK5RAP1Q96SZ6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK5RAP1Q96SZ6 GPX1-201ENST00000419349 1106 ntBASIC26.24■■□□□ 1.79
CDK5RAP1Q96SZ6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK5RAP1Q96SZ6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK5RAP1Q96SZ6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDK5RAP1Q96SZ6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.23■■□□□ 1.79
CDK5RAP1Q96SZ6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.23■■□□□ 1.79
CDK5RAP1Q96SZ6 AC022413.1-201ENST00000624602 984 ntBASIC26.23■■□□□ 1.79
CDK5RAP1Q96SZ6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDK5RAP1Q96SZ6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.22■■□□□ 1.79
CDK5RAP1Q96SZ6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP1Q96SZ6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP1Q96SZ6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP1Q96SZ6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP1Q96SZ6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CDK5RAP1Q96SZ6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CDK5RAP1Q96SZ6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP1Q96SZ6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP1Q96SZ6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDK5RAP1Q96SZ6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDK5RAP1Q96SZ6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDK5RAP1Q96SZ6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.2■■□□□ 1.78
CDK5RAP1Q96SZ6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDK5RAP1Q96SZ6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDK5RAP1Q96SZ6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.2■■□□□ 1.78
CDK5RAP1Q96SZ6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDK5RAP1Q96SZ6 AC018358.1-201ENST00000631079 1402 ntBASIC26.19■■□□□ 1.78
CDK5RAP1Q96SZ6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.18■■□□□ 1.78
CDK5RAP1Q96SZ6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.18■■□□□ 1.78
CDK5RAP1Q96SZ6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CDK5RAP1Q96SZ6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.17■■□□□ 1.78
CDK5RAP1Q96SZ6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.17■■□□□ 1.78
CDK5RAP1Q96SZ6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDK5RAP1Q96SZ6 RNF126P1-201ENST00000567452 1320 ntBASIC26.16■■□□□ 1.78
CDK5RAP1Q96SZ6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDK5RAP1Q96SZ6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.16■■□□□ 1.78
CDK5RAP1Q96SZ6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.16■■□□□ 1.78
CDK5RAP1Q96SZ6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDK5RAP1Q96SZ6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.15■■□□□ 1.78
CDK5RAP1Q96SZ6 AC060814.1-201ENST00000554326 538 ntBASIC26.15■■□□□ 1.78
CDK5RAP1Q96SZ6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDK5RAP1Q96SZ6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDK5RAP1Q96SZ6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDK5RAP1Q96SZ6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDK5RAP1Q96SZ6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDK5RAP1Q96SZ6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDK5RAP1Q96SZ6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDK5RAP1Q96SZ6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDK5RAP1Q96SZ6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.13■■□□□ 1.77
CDK5RAP1Q96SZ6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDK5RAP1Q96SZ6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDK5RAP1Q96SZ6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.12■■□□□ 1.77
CDK5RAP1Q96SZ6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDK5RAP1Q96SZ6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
CDK5RAP1Q96SZ6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDK5RAP1Q96SZ6 RARRES2P2-201ENST00000394842 485 ntBASIC26.1■■□□□ 1.77
CDK5RAP1Q96SZ6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.1■■□□□ 1.77
CDK5RAP1Q96SZ6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDK5RAP1Q96SZ6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDK5RAP1Q96SZ6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.09■■□□□ 1.77
CDK5RAP1Q96SZ6 AC139426.1-201ENST00000568218 2529 ntBASIC26.09■■□□□ 1.77
CDK5RAP1Q96SZ6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDK5RAP1Q96SZ6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CDK5RAP1Q96SZ6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDK5RAP1Q96SZ6 DRD5P2-201ENST00000421395 2012 ntBASIC26.09■■□□□ 1.77
CDK5RAP1Q96SZ6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms