Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Odf4Q8VI88 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Odf4Q8VI88 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.25■□□□□ 0.83
Odf4Q8VI88 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Odf4Q8VI88 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.24■□□□□ 0.83
Odf4Q8VI88 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Odf4Q8VI88 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Odf4Q8VI88 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Odf4Q8VI88 Gm30023-201ENSMUST00000197970 889 ntBASIC20.23■□□□□ 0.83
Odf4Q8VI88 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Odf4Q8VI88 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.23■□□□□ 0.83
Odf4Q8VI88 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Odf4Q8VI88 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Odf4Q8VI88 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Odf4Q8VI88 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Odf4Q8VI88 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Odf4Q8VI88 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Odf4Q8VI88 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Odf4Q8VI88 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.2■□□□□ 0.82
Odf4Q8VI88 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Odf4Q8VI88 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Odf4Q8VI88 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Odf4Q8VI88 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Odf4Q8VI88 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Odf4Q8VI88 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Odf4Q8VI88 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Odf4Q8VI88 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Odf4Q8VI88 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Odf4Q8VI88 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Odf4Q8VI88 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Odf4Q8VI88 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Odf4Q8VI88 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Odf4Q8VI88 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.15■□□□□ 0.82
Odf4Q8VI88 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Odf4Q8VI88 Particl-201ENSMUST00000205370 1560 ntBASIC20.15■□□□□ 0.82
Odf4Q8VI88 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.15■□□□□ 0.82
Odf4Q8VI88 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Odf4Q8VI88 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Odf4Q8VI88 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Odf4Q8VI88 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Odf4Q8VI88 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Odf4Q8VI88 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Odf4Q8VI88 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Odf4Q8VI88 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Odf4Q8VI88 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.13■□□□□ 0.81
Odf4Q8VI88 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Odf4Q8VI88 Gm6311-201ENSMUST00000073790 878 ntBASIC20.12■□□□□ 0.81
Odf4Q8VI88 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Odf4Q8VI88 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Odf4Q8VI88 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Odf4Q8VI88 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Odf4Q8VI88 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.11■□□□□ 0.81
Odf4Q8VI88 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Odf4Q8VI88 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Odf4Q8VI88 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Odf4Q8VI88 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Odf4Q8VI88 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Odf4Q8VI88 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Odf4Q8VI88 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.09■□□□□ 0.81
Odf4Q8VI88 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.08■□□□□ 0.8
Odf4Q8VI88 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Odf4Q8VI88 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Odf4Q8VI88 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Odf4Q8VI88 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Odf4Q8VI88 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Odf4Q8VI88 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms