Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 TGL5YOR081C 2250 nt11.14□□□□□ -0.63
TY1B-JR1P47098 OSW2YLR054C 2175 nt11.14□□□□□ -0.63
TY1B-JR1P47098 YKL147CYKL147C 618 nt11.14□□□□□ -0.63
TY1B-JR1P47098 HTZ1YOL012C 405 nt11.14□□□□□ -0.63
TY1B-JR1P47098 GET4YOR164C 939 nt11.14□□□□□ -0.63
TY1B-JR1P47098 FYV1YDR024W 486 nt11.13□□□□□ -0.63
TY1B-JR1P47098 DAL80YKR034W 810 nt11.13□□□□□ -0.63
TY1B-JR1P47098 BDS1YOL164W 1941 nt11.13□□□□□ -0.63
TY1B-JR1P47098 MED6YHR058C 888 nt11.13□□□□□ -0.63
TY1B-JR1P47098 MPE1YKL059C 1326 nt11.12□□□□□ -0.63
TY1B-JR1P47098 TUB1YML085C 1344 nt11.11□□□□□ -0.63
TY1B-JR1P47098 YLR072WYLR072W 2082 nt11.11□□□□□ -0.63
TY1B-JR1P47098 FET5YFL041W 1869 nt11.11□□□□□ -0.63
TY1B-JR1P47098 YHR033WYHR033W 1272 nt11.11□□□□□ -0.63
TY1B-JR1P47098 HXT11YOL156W 1704 nt11.1□□□□□ -0.63
TY1B-JR1P47098 DMC1YER179W 1005 nt11.1□□□□□ -0.63
TY1B-JR1P47098 YJL213WYJL213W 996 nt11.1□□□□□ -0.63
TY1B-JR1P47098 PAM17YKR065C 594 nt11.1□□□□□ -0.63
TY1B-JR1P47098 YPR076WYPR076W 375 nt11.1□□□□□ -0.63
TY1B-JR1P47098 FMP40YPL222W 2067 nt11.1□□□□□ -0.63
TY1B-JR1P47098 LEA1YPL213W 717 nt11.08□□□□□ -0.64
TY1B-JR1P47098 YDL144CYDL144C 1071 nt11.08□□□□□ -0.64
TY1B-JR1P47098 ADE5,7YGL234W 2409 nt11.07□□□□□ -0.64
TY1B-JR1P47098 COX15YER141W 1461 nt11.07□□□□□ -0.64
TY1B-JR1P47098 YDR215CYDR215C 414 nt11.06□□□□□ -0.64
TY1B-JR1P47098 COQ3YOL096C 939 nt11.05□□□□□ -0.64
TY1B-JR1P47098 ADH5YBR145W 1056 nt11.05□□□□□ -0.64
TY1B-JR1P47098 CDA1YLR307W 906 nt11.03□□□□□ -0.64
TY1B-JR1P47098 FIT2YOR382W 462 nt11.03□□□□□ -0.64
TY1B-JR1P47098 ASR1YPR093C 867 nt11.03□□□□□ -0.64
TY1B-JR1P47098 RTC4YNL254C 1206 nt11.03□□□□□ -0.64
TY1B-JR1P47098 ASF1YJL115W 840 nt11.01□□□□□ -0.65
TY1B-JR1P47098 PPH21YDL134C 1110 nt11□□□□□ -0.65
TY1B-JR1P47098 RBS1YDL189W 1374 nt11□□□□□ -0.65
TY1B-JR1P47098 YNR001W-AYNR001W-A 219 nt11□□□□□ -0.65
TY1B-JR1P47098 CIT2YCR005C 1383 nt11□□□□□ -0.65
TY1B-JR1P47098 YPL102CYPL102C 303 nt10.99□□□□□ -0.65
TY1B-JR1P47098 PLB2YMR006C 2121 nt10.99□□□□□ -0.65
TY1B-JR1P47098 APE4YHR113W 1473 nt10.98□□□□□ -0.65
TY1B-JR1P47098 PRE3YJL001W 648 nt10.98□□□□□ -0.65
TY1B-JR1P47098 YKL102CYKL102C 306 nt10.97□□□□□ -0.65
TY1B-JR1P47098 MRPS18YNL306W 654 nt10.97□□□□□ -0.65
TY1B-JR1P47098 YML018CYML018C 1182 nt10.96□□□□□ -0.65
TY1B-JR1P47098 YLR361C-AYLR361C-A 297 nt10.95□□□□□ -0.66
TY1B-JR1P47098 KTR4YBR199W 1395 nt10.95□□□□□ -0.66
TY1B-JR1P47098 GPD2YOL059W 1323 nt10.95□□□□□ -0.66
TY1B-JR1P47098 PSD1YNL169C 1503 nt10.95□□□□□ -0.66
TY1B-JR1P47098 YIP4YGL198W 708 nt10.95□□□□□ -0.66
TY1B-JR1P47098 FPR3YML074C 1236 nt10.94□□□□□ -0.66
TY1B-JR1P47098 CDC1YDR182W 1476 nt10.93□□□□□ -0.66
TY1B-JR1P47098 YNL140CYNL140C 570 nt10.93□□□□□ -0.66
TY1B-JR1P47098 YCR049CYCR049C 447 nt10.91□□□□□ -0.66
TY1B-JR1P47098 YKR045CYKR045C 552 nt10.91□□□□□ -0.66
TY1B-JR1P47098 SAL1YNL083W 1485 nt10.9□□□□□ -0.66
TY1B-JR1P47098 TFG2YGR005C 1203 nt10.9□□□□□ -0.67
TY1B-JR1P47098 YNL092WYNL092W 1203 nt10.9□□□□□ -0.67
TY1B-JR1P47098 RCF2YNR018W 675 nt10.9□□□□□ -0.67
TY1B-JR1P47098 NTG2YOL043C 1143 nt10.9□□□□□ -0.67
TY1B-JR1P47098 LEO1YOR123C 1395 nt10.89□□□□□ -0.67
TY1B-JR1P47098 FTH1YBR207W 1398 nt10.89□□□□□ -0.67
TY1B-JR1P47098 TOP3YLR234W 1971 nt10.89□□□□□ -0.67
TY1B-JR1P47098 TAF9YMR236W 474 nt10.88□□□□□ -0.67
TY1B-JR1P47098 YDR187CYDR187C 519 nt10.88□□□□□ -0.67
TY1B-JR1P47098 PET10YKR046C 852 nt10.88□□□□□ -0.67
TY1B-JR1P47098 RIM8YGL045W 1629 nt10.87□□□□□ -0.67
TY1B-JR1P47098 YMR295CYMR295C 594 nt10.87□□□□□ -0.67
TY1B-JR1P47098 RRP9YPR137W 1722 nt10.87□□□□□ -0.67
TY1B-JR1P47098 YPQ2YDR352W 954 nt10.85□□□□□ -0.67
TY1B-JR1P47098 CAR2YLR438W 1275 nt10.84□□□□□ -0.67
TY1B-JR1P47098 SUF3tG(CCC)D 72 nt10.83□□□□□ -0.68
TY1B-JR1P47098 YBR113WYBR113W 483 nt10.83□□□□□ -0.68
TY1B-JR1P47098 URA8YJR103W 1737 nt10.83□□□□□ -0.68
TY1B-JR1P47098 ADE16YLR028C 1776 nt10.82□□□□□ -0.68
TY1B-JR1P47098 BRN1YBL097W 2265 nt10.81□□□□□ -0.68
TY1B-JR1P47098 PET117YER058W 324 nt10.81□□□□□ -0.68
TY1B-JR1P47098 GCG1YER163C 699 nt10.8□□□□□ -0.68
TY1B-JR1P47098 YLL058WYLL058W 1728 nt10.8□□□□□ -0.68
TY1B-JR1P47098 TSR2YLR435W 618 nt10.79□□□□□ -0.68
TY1B-JR1P47098 YAH1YPL252C 519 nt10.79□□□□□ -0.68
TY1B-JR1P47098 NUP49YGL172W 1419 nt10.77□□□□□ -0.69
TY1B-JR1P47098 YMR122CYMR122C 375 nt10.77□□□□□ -0.69
TY1B-JR1P47098 RNH201YNL072W 924 nt10.77□□□□□ -0.69
TY1B-JR1P47098 YNR005CYNR005C 405 nt10.77□□□□□ -0.69
TY1B-JR1P47098 PEX28YHR150W 1740 nt10.76□□□□□ -0.69
TY1B-JR1P47098 MSC3YLR219W 2187 nt10.76□□□□□ -0.69
TY1B-JR1P47098 RPS28AYOR167C 204 nt10.75□□□□□ -0.69
TY1B-JR1P47098 AVL9YLR114C 2295 nt10.75□□□□□ -0.69
TY1B-JR1P47098 YGL114WYGL114W 2178 nt10.75□□□□□ -0.69
TY1B-JR1P47098 HSL7YBR133C 2484 nt10.75□□□□□ -0.69
TY1B-JR1P47098 CKB1YGL019W 837 nt10.74□□□□□ -0.69
TY1B-JR1P47098 CYT1YOR065W 930 nt10.74□□□□□ -0.69
TY1B-JR1P47098 RDR1YOR380W 1641 nt10.74□□□□□ -0.69
TY1B-JR1P47098 TDH2YJR009C 999 nt10.72□□□□□ -0.69
TY1B-JR1P47098 YHL008CYHL008C 1884 nt10.72□□□□□ -0.69
TY1B-JR1P47098 TPO4YOR273C 1980 nt10.72□□□□□ -0.69
TY1B-JR1P47098 YHL018WYHL018W 363 nt10.71□□□□□ -0.69
TY1B-JR1P47098 UIP4YPL186C 915 nt10.7□□□□□ -0.7
TY1B-JR1P47098 TAE1YBR261C 699 nt10.7□□□□□ -0.7
TY1B-JR1P47098 MAM3YOL060C 2121 nt10.69□□□□□ -0.7
TY1B-JR1P47098 YLL056CYLL056C 897 nt10.68□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 44 ms