Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 KTR4YBR199W 1395 nt9.36□□□□□ -0.91
TY4B-HP0C2J7 YKL153WYKL153W 510 nt9.35□□□□□ -0.91
TY4B-HP0C2J7 RTC4YNL254C 1206 nt9.35□□□□□ -0.91
TY4B-HP0C2J7 GET4YOR164C 939 nt9.35□□□□□ -0.91
TY4B-HP0C2J7 PAB1YER165W 1734 nt9.35□□□□□ -0.91
TY4B-HP0C2J7 ERR3YMR323W 1314 nt9.34□□□□□ -0.91
TY4B-HP0C2J7 TUB1YML085C 1344 nt9.33□□□□□ -0.92
TY4B-HP0C2J7 YNL140CYNL140C 570 nt9.33□□□□□ -0.92
TY4B-HP0C2J7 FTH1YBR207W 1398 nt9.32□□□□□ -0.92
TY4B-HP0C2J7 RPL2AYFR031C-A 765 nt9.32□□□□□ -0.92
TY4B-HP0C2J7 RPL2BYIL018W 765 nt9.32□□□□□ -0.92
TY4B-HP0C2J7 QRI5YLR204W 336 nt9.31□□□□□ -0.92
TY4B-HP0C2J7 RCF2YNR018W 675 nt9.31□□□□□ -0.92
TY4B-HP0C2J7 FSF1YOR271C 984 nt9.31□□□□□ -0.92
TY4B-HP0C2J7 ILV6YCL009C 930 nt9.31□□□□□ -0.92
TY4B-HP0C2J7 PAM17YKR065C 594 nt9.31□□□□□ -0.92
TY4B-HP0C2J7 AGX1YFL030W 1158 nt9.3□□□□□ -0.92
TY4B-HP0C2J7 YIL029W-AYIL029W-A 372 nt9.3□□□□□ -0.92
TY4B-HP0C2J7 CIT2YCR005C 1383 nt9.3□□□□□ -0.92
TY4B-HP0C2J7 HOC1YJR075W 1191 nt9.29□□□□□ -0.92
TY4B-HP0C2J7 COX15YER141W 1461 nt9.29□□□□□ -0.92
TY4B-HP0C2J7 TPO4YOR273C 1980 nt9.29□□□□□ -0.92
TY4B-HP0C2J7 PET10YKR046C 852 nt9.28□□□□□ -0.92
TY4B-HP0C2J7 LEO1YOR123C 1395 nt9.28□□□□□ -0.92
TY4B-HP0C2J7 YMR252CYMR252C 405 nt9.28□□□□□ -0.92
TY4B-HP0C2J7 ASR1YPR093C 867 nt9.28□□□□□ -0.92
TY4B-HP0C2J7 ASF1YJL115W 840 nt9.27□□□□□ -0.93
TY4B-HP0C2J7 APE4YHR113W 1473 nt9.26□□□□□ -0.93
TY4B-HP0C2J7 YHR218W-AYHR218W-A 318 nt9.26□□□□□ -0.93
TY4B-HP0C2J7 YBL112CYBL112C 318 nt9.26□□□□□ -0.93
TY4B-HP0C2J7 FIT2YOR382W 462 nt9.26□□□□□ -0.93
TY4B-HP0C2J7 MIM1YOL026C 342 nt9.26□□□□□ -0.93
TY4B-HP0C2J7 YOL046CYOL046C 675 nt9.26□□□□□ -0.93
TY4B-HP0C2J7 OSW2YLR054C 2175 nt9.25□□□□□ -0.93
TY4B-HP0C2J7 FMP40YPL222W 2067 nt9.25□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)BtD(GUC)B 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)DtD(GUC)D 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)G1tD(GUC)G1 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)G2tD(GUC)G2 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)I1tD(GUC)I1 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)I2tD(GUC)I2 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)J1tD(GUC)J1 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)J2tD(GUC)J2 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)J3tD(GUC)J3 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)J4tD(GUC)J4 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)KtD(GUC)K 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)L1tD(GUC)L1 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)L2tD(GUC)L2 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)MtD(GUC)M 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 tD(GUC)OtD(GUC)O 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 YEL075W-AYEL075W-A 612 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 YLR463CYLR463C 552 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 HEL2YDR266C 1920 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 SUF3tG(CCC)D 72 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 CAR2YLR438W 1275 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 YPR076WYPR076W 375 nt9.24□□□□□ -0.93
TY4B-HP0C2J7 NBA1YOL070C 1506 nt9.23□□□□□ -0.93
TY4B-HP0C2J7 NTG2YOL043C 1143 nt9.23□□□□□ -0.93
TY4B-HP0C2J7 YOR200WYOR200W 399 nt9.23□□□□□ -0.93
TY4B-HP0C2J7 PLB2YMR006C 2121 nt9.22□□□□□ -0.93
TY4B-HP0C2J7 TOP3YLR234W 1971 nt9.21□□□□□ -0.93
TY4B-HP0C2J7 CKB1YGL019W 837 nt9.2□□□□□ -0.94
TY4B-HP0C2J7 snR4snR4 186 nt9.2□□□□□ -0.94
TY4B-HP0C2J7 ADE5,7YGL234W 2409 nt9.2□□□□□ -0.94
TY4B-HP0C2J7 PDC5YLR134W 1692 nt9.19□□□□□ -0.94
TY4B-HP0C2J7 YKL102CYKL102C 306 nt9.18□□□□□ -0.94
TY4B-HP0C2J7 YAH1YPL252C 519 nt9.18□□□□□ -0.94
TY4B-HP0C2J7 ADH5YBR145W 1056 nt9.18□□□□□ -0.94
TY4B-HP0C2J7 FYV1YDR024W 486 nt9.17□□□□□ -0.94
TY4B-HP0C2J7 YNR001W-AYNR001W-A 219 nt9.17□□□□□ -0.94
TY4B-HP0C2J7 URA8YJR103W 1737 nt9.17□□□□□ -0.94
TY4B-HP0C2J7 PPH21YDL134C 1110 nt9.17□□□□□ -0.94
TY4B-HP0C2J7 AVL9YLR114C 2295 nt9.16□□□□□ -0.94
TY4B-HP0C2J7 PEX28YHR150W 1740 nt9.16□□□□□ -0.94
TY4B-HP0C2J7 YKL147CYKL147C 618 nt9.16□□□□□ -0.94
TY4B-HP0C2J7 YKR045CYKR045C 552 nt9.16□□□□□ -0.94
TY4B-HP0C2J7 MRPS18YNL306W 654 nt9.16□□□□□ -0.94
TY4B-HP0C2J7 YBR113WYBR113W 483 nt9.15□□□□□ -0.94
TY4B-HP0C2J7 LIP5YOR196C 1245 nt9.15□□□□□ -0.95
TY4B-HP0C2J7 COQ3YOL096C 939 nt9.13□□□□□ -0.95
TY4B-HP0C2J7 RDR1YOR380W 1641 nt9.13□□□□□ -0.95
TY4B-HP0C2J7 TFG2YGR005C 1203 nt9.12□□□□□ -0.95
TY4B-HP0C2J7 YLR361C-AYLR361C-A 297 nt9.12□□□□□ -0.95
TY4B-HP0C2J7 YHL008CYHL008C 1884 nt9.12□□□□□ -0.95
TY4B-HP0C2J7 YIP4YGL198W 708 nt9.11□□□□□ -0.95
TY4B-HP0C2J7 ERG24YNL280C 1317 nt9.11□□□□□ -0.95
TY4B-HP0C2J7 YPQ2YDR352W 954 nt9.1□□□□□ -0.95
TY4B-HP0C2J7 RBS1YDL189W 1374 nt9.1□□□□□ -0.95
TY4B-HP0C2J7 CDC1YDR182W 1476 nt9.1□□□□□ -0.95
TY4B-HP0C2J7 PET117YER058W 324 nt9.1□□□□□ -0.95
TY4B-HP0C2J7 IRC7YFR055W 1023 nt9.1□□□□□ -0.95
TY4B-HP0C2J7 MED6YHR058C 888 nt9.1□□□□□ -0.95
TY4B-HP0C2J7 YLL058WYLL058W 1728 nt9.09□□□□□ -0.95
TY4B-HP0C2J7 YML018CYML018C 1182 nt9.09□□□□□ -0.95
TY4B-HP0C2J7 YDL144CYDL144C 1071 nt9.08□□□□□ -0.96
TY4B-HP0C2J7 YDR187CYDR187C 519 nt9.08□□□□□ -0.96
TY4B-HP0C2J7 SNA3YJL151C 402 nt9.08□□□□□ -0.96
TY4B-HP0C2J7 HNM1YGL077C 1692 nt9.07□□□□□ -0.96
TY4B-HP0C2J7 BRN1YBL097W 2265 nt9.07□□□□□ -0.96
TY4B-HP0C2J7 TAF9YMR236W 474 nt9.07□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 105.3 ms