RNA–Protein interactions for RNA: ENST00000642004.1

SAMMSON-225, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-225ENST00000642004 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
SAMMSON-225ENST00000642004 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
SAMMSON-225ENST00000642004 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
SAMMSON-225ENST00000642004 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
SAMMSON-225ENST00000642004 FOXD1Q16676 465 aa14.72□□□□□ -0.05
SAMMSON-225ENST00000642004 POTEDQ86YR6 584 aa14.44□□□□□ -0.1
SAMMSON-225ENST00000642004 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
SAMMSON-225ENST00000642004 MSH5O43196 834 aa13.96□□□□□ -0.17
SAMMSON-225ENST00000642004 PIAS4Q8N2W9 510 aaPredicted RBP13.65□□□□□ -0.22
SAMMSON-225ENST00000642004 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
SAMMSON-225ENST00000642004 ADRA2BP18089 450 aa13.57□□□□□ -0.24
SAMMSON-225ENST00000642004 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
SAMMSON-225ENST00000642004 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
SAMMSON-225ENST00000642004 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
SAMMSON-225ENST00000642004 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
SAMMSON-225ENST00000642004 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
SAMMSON-225ENST00000642004 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
SAMMSON-225ENST00000642004 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
SAMMSON-225ENST00000642004 KCNA4P22459 653 aa12.13□□□□□ -0.47
SAMMSON-225ENST00000642004 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
SAMMSON-225ENST00000642004 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
SAMMSON-225ENST00000642004 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
SAMMSON-225ENST00000642004 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
SAMMSON-225ENST00000642004 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
SAMMSON-225ENST00000642004 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
SAMMSON-225ENST00000642004 RNF39Q9H2S5 420 aa11.87□□□□□ -0.51
SAMMSON-225ENST00000642004 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
SAMMSON-225ENST00000642004 C1QBPQ07021 282 aaKnown RBP11.67□□□□□ -0.54
SAMMSON-225ENST00000642004 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
SAMMSON-225ENST00000642004 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
SAMMSON-225ENST00000642004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
SAMMSON-225ENST00000642004 POTEHQ6S545 545 aa11.23□□□□□ -0.61
SAMMSON-225ENST00000642004 ZBTB22O15209 634 aa11.19□□□□□ -0.62
SAMMSON-225ENST00000642004 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
SAMMSON-225ENST00000642004 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
SAMMSON-225ENST00000642004 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
SAMMSON-225ENST00000642004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.05□□□□□ -0.64
SAMMSON-225ENST00000642004 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
SAMMSON-225ENST00000642004 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
SAMMSON-225ENST00000642004 DSG3P32926 999 aa10.96□□□□□ -0.65
SAMMSON-225ENST00000642004 APLP2Q06481 763 aa10.96□□□□□ -0.65
SAMMSON-225ENST00000642004 CAPN15O75808 1086 aa10.91□□□□□ -0.66
SAMMSON-225ENST00000642004 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
SAMMSON-225ENST00000642004 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
SAMMSON-225ENST00000642004 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
SAMMSON-225ENST00000642004 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
SAMMSON-225ENST00000642004 RTN4Q9NQC3 1192 aaKnown RBP10.76□□□□□ -0.69
SAMMSON-225ENST00000642004 AMER1Q5JTC6 1135 aaPredicted RBP10.75□□□□□ -0.69
SAMMSON-225ENST00000642004 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
SAMMSON-225ENST00000642004 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
SAMMSON-225ENST00000642004 ABCB7O75027 752 aa10.61□□□□□ -0.71
SAMMSON-225ENST00000642004 POLA2Q14181 598 aa10.54□□□□□ -0.72
SAMMSON-225ENST00000642004 FKBP8Q14318 412 aa10.48□□□□□ -0.73
SAMMSON-225ENST00000642004 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
SAMMSON-225ENST00000642004 ZBTB12Q9Y330 459 aaPredicted RBP10.45□□□□□ -0.74
SAMMSON-225ENST00000642004 CHRDL2Q6WN34 429 aa10.42□□□□□ -0.74
SAMMSON-225ENST00000642004 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
SAMMSON-225ENST00000642004 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
SAMMSON-225ENST00000642004 FBLN2P98095 1184 aa10.28□□□□□ -0.76
SAMMSON-225ENST00000642004 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
SAMMSON-225ENST00000642004 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
SAMMSON-225ENST00000642004 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
SAMMSON-225ENST00000642004 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
SAMMSON-225ENST00000642004 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
SAMMSON-225ENST00000642004 SSUH2Q9Y2M2 353 aa10.09□□□□□ -0.79
SAMMSON-225ENST00000642004 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
SAMMSON-225ENST00000642004 HAX1O00165 279 aa10.03□□□□□ -0.8
SAMMSON-225ENST00000642004 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
SAMMSON-225ENST00000642004 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
SAMMSON-225ENST00000642004 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
SAMMSON-225ENST00000642004 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.82
SAMMSON-225ENST00000642004 PROM2Q8N271 834 aa9.93□□□□□ -0.82
SAMMSON-225ENST00000642004 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
SAMMSON-225ENST00000642004 FBXO3Q9UK99 471 aa9.92□□□□□ -0.82
SAMMSON-225ENST00000642004 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
SAMMSON-225ENST00000642004 EVX2Q03828 476 aa9.88□□□□□ -0.83
SAMMSON-225ENST00000642004 PABPN1Q86U42 306 aaKnown RBP eCLIP9.86□□□□□ -0.83
SAMMSON-225ENST00000642004 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
SAMMSON-225ENST00000642004 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
SAMMSON-225ENST00000642004 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
SAMMSON-225ENST00000642004 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-225ENST00000642004 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-225ENST00000642004 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
SAMMSON-225ENST00000642004 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
SAMMSON-225ENST00000642004 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
SAMMSON-225ENST00000642004 PKD2Q13563 968 aa9.66□□□□□ -0.86
SAMMSON-225ENST00000642004 BCANQ96GW7 911 aa9.66□□□□□ -0.86
SAMMSON-225ENST00000642004 LHX8Q68G74 356 aa9.65□□□□□ -0.86
SAMMSON-225ENST00000642004 C19orf67A6NJJ6 358 aa9.64□□□□□ -0.87
SAMMSON-225ENST00000642004 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
SAMMSON-225ENST00000642004 GABBR2O75899 941 aa9.62□□□□□ -0.87
SAMMSON-225ENST00000642004 DCAF8L2P0C7V8 631 aa9.62□□□□□ -0.87
SAMMSON-225ENST00000642004 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
SAMMSON-225ENST00000642004 CREBZFQ9NS37 354 aa9.56□□□□□ -0.88
SAMMSON-225ENST00000642004 TAOK2Q9UL54 1235 aa9.56□□□□□ -0.88
SAMMSON-225ENST00000642004 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
SAMMSON-225ENST00000642004 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
SAMMSON-225ENST00000642004 CHADLQ6NUI6 762 aa9.48□□□□□ -0.89
SAMMSON-225ENST00000642004 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
SAMMSON-225ENST00000642004 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms