RNA–Protein interactions for RNA: ENST00000641929.1

SAMMSON-224, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 849 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-224ENST00000641929 AEBP2Q6ZN18 517 aaPredicted RBP32.29■■■□□ 2.76
SAMMSON-224ENST00000641929 CHIC1Q5VXU3 224 aa30.58■■■□□ 2.49
SAMMSON-224ENST00000641929 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
SAMMSON-224ENST00000641929 PHF23Q9BUL5 403 aaPredicted RBP27.22■■□□□ 1.95
SAMMSON-224ENST00000641929 FOXD1Q16676 465 aa25.72■■□□□ 1.71
SAMMSON-224ENST00000641929 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
SAMMSON-224ENST00000641929 MSH5O43196 834 aa24.18■■□□□ 1.46
SAMMSON-224ENST00000641929 PIAS4Q8N2W9 510 aaPredicted RBP24.05■■□□□ 1.44
SAMMSON-224ENST00000641929 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
SAMMSON-224ENST00000641929 ADRA2BP18089 450 aa23.86■■□□□ 1.41
SAMMSON-224ENST00000641929 POTEDQ86YR6 584 aa23.75■■□□□ 1.39
SAMMSON-224ENST00000641929 MAPK8IP2Q13387 824 aaPredicted RBP21.93■■□□□ 1.1
SAMMSON-224ENST00000641929 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
SAMMSON-224ENST00000641929 DMRT2Q9Y5R5 561 aa21.88■■□□□ 1.09
SAMMSON-224ENST00000641929 PPP4R3CPQ6ZMV5 832 aa21.35■■□□□ 1.01
SAMMSON-224ENST00000641929 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
SAMMSON-224ENST00000641929 DCAF8L1A6NGE4 600 aa21■□□□□ 0.95
SAMMSON-224ENST00000641929 CNKSR2Q8WXI2 1034 aa21■□□□□ 0.95
SAMMSON-224ENST00000641929 RNF216Q9NWF9 866 aaPredicted RBP20.84■□□□□ 0.93
SAMMSON-224ENST00000641929 CACNB1Q02641 598 aaPredicted RBP20.8■□□□□ 0.92
SAMMSON-224ENST00000641929 RNF39Q9H2S5 420 aa20.59■□□□□ 0.89
SAMMSON-224ENST00000641929 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
SAMMSON-224ENST00000641929 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
SAMMSON-224ENST00000641929 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
SAMMSON-224ENST00000641929 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
SAMMSON-224ENST00000641929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
SAMMSON-224ENST00000641929 KCNA4P22459 653 aa19.7■□□□□ 0.74
SAMMSON-224ENST00000641929 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
SAMMSON-224ENST00000641929 CAPN15O75808 1086 aa19.33■□□□□ 0.68
SAMMSON-224ENST00000641929 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
SAMMSON-224ENST00000641929 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
SAMMSON-224ENST00000641929 DSG3P32926 999 aa19.23■□□□□ 0.67
SAMMSON-224ENST00000641929 APLP2Q06481 763 aa19.11■□□□□ 0.65
SAMMSON-224ENST00000641929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
SAMMSON-224ENST00000641929 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
SAMMSON-224ENST00000641929 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
SAMMSON-224ENST00000641929 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
SAMMSON-224ENST00000641929 SAMD1Q6SPF0 538 aaPredicted RBP18.93■□□□□ 0.62
SAMMSON-224ENST00000641929 ABCB7O75027 752 aa18.85■□□□□ 0.61
SAMMSON-224ENST00000641929 MYCNP04198 464 aaPredicted RBP18.72■□□□□ 0.59
SAMMSON-224ENST00000641929 POTEHQ6S545 545 aa18.61■□□□□ 0.57
SAMMSON-224ENST00000641929 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
SAMMSON-224ENST00000641929 POLA2Q14181 598 aa18.45■□□□□ 0.54
SAMMSON-224ENST00000641929 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
SAMMSON-224ENST00000641929 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
SAMMSON-224ENST00000641929 ATF5Q9Y2D1 282 aaPredicted RBP18.23■□□□□ 0.51
SAMMSON-224ENST00000641929 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
SAMMSON-224ENST00000641929 ZBTB22O15209 634 aa18.08■□□□□ 0.48
SAMMSON-224ENST00000641929 CHRDL2Q6WN34 429 aa18.02■□□□□ 0.48
SAMMSON-224ENST00000641929 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
SAMMSON-224ENST00000641929 ATXN8OSP0DMR3 200 aa17.91■□□□□ 0.46
SAMMSON-224ENST00000641929 OSCARQ8IYS5 282 aa17.88■□□□□ 0.45
SAMMSON-224ENST00000641929 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
SAMMSON-224ENST00000641929 FBLN2P98095 1184 aa17.62■□□□□ 0.41
SAMMSON-224ENST00000641929 PITPNM1O00562 1244 aa17.56■□□□□ 0.4
SAMMSON-224ENST00000641929 PIP4P2Q8N4L2 257 aa17.54■□□□□ 0.4
SAMMSON-224ENST00000641929 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
SAMMSON-224ENST00000641929 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
SAMMSON-224ENST00000641929 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.4
SAMMSON-224ENST00000641929 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
SAMMSON-224ENST00000641929 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
SAMMSON-224ENST00000641929 SP7Q8TDD2 431 aaPredicted RBP17.4■□□□□ 0.38
SAMMSON-224ENST00000641929 HAX1O00165 279 aa17.28■□□□□ 0.36
SAMMSON-224ENST00000641929 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
SAMMSON-224ENST00000641929 SPDYE1Q8NFV5 336 aaPredicted RBP17.26■□□□□ 0.35
SAMMSON-224ENST00000641929 SSUH2Q9Y2M2 353 aa17.26■□□□□ 0.35
SAMMSON-224ENST00000641929 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
SAMMSON-224ENST00000641929 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
SAMMSON-224ENST00000641929 PRKAR2AP13861 404 aaKnown RBP17.11■□□□□ 0.33
SAMMSON-224ENST00000641929 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
SAMMSON-224ENST00000641929 EVX2Q03828 476 aa16.99■□□□□ 0.31
SAMMSON-224ENST00000641929 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
SAMMSON-224ENST00000641929 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
SAMMSON-224ENST00000641929 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
SAMMSON-224ENST00000641929 CHADLQ6NUI6 762 aa16.86■□□□□ 0.29
SAMMSON-224ENST00000641929 GABBR2O75899 941 aa16.64■□□□□ 0.25
SAMMSON-224ENST00000641929 FARP1Q9Y4F1 1045 aaPredicted RBP16.63■□□□□ 0.25
SAMMSON-224ENST00000641929 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
SAMMSON-224ENST00000641929 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
SAMMSON-224ENST00000641929 SPDYE4A6NLX3 237 aa16.55■□□□□ 0.24
SAMMSON-224ENST00000641929 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
SAMMSON-224ENST00000641929 CLCN6P51797 869 aa16.41■□□□□ 0.22
SAMMSON-224ENST00000641929 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
SAMMSON-224ENST00000641929 LHX8Q68G74 356 aa16.31■□□□□ 0.2
SAMMSON-224ENST00000641929 ZRANB1Q9UGI0 708 aa16.31■□□□□ 0.2
SAMMSON-224ENST00000641929 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
SAMMSON-224ENST00000641929 DCBLD2Q96PD2 775 aa16.22■□□□□ 0.19
SAMMSON-224ENST00000641929 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
SAMMSON-224ENST00000641929 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
SAMMSON-224ENST00000641929 MNX1P50219 401 aaPredicted RBP16.13■□□□□ 0.17
SAMMSON-224ENST00000641929 PROM2Q8N271 834 aa16.12■□□□□ 0.17
SAMMSON-224ENST00000641929 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
SAMMSON-224ENST00000641929 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
SAMMSON-224ENST00000641929 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
SAMMSON-224ENST00000641929 TSPYL2Q9H2G4 693 aaPredicted RBP15.85■□□□□ 0.13
SAMMSON-224ENST00000641929 MS4A3Q96HJ5 214 aa15.84■□□□□ 0.13
SAMMSON-224ENST00000641929 MIER1Q8N108 512 aa15.81■□□□□ 0.12
SAMMSON-224ENST00000641929 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
SAMMSON-224ENST00000641929 ASTLQ6HA08 431 aaPredicted RBP15.77■□□□□ 0.12
SAMMSON-224ENST00000641929 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms