RNA–Protein interactions for RNA: ENST00000641919.1

CASC19-265, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-265ENST00000641919 AEBP2Q6ZN18 517 aaPredicted RBP28.69■■■□□ 2.18
CASC19-265ENST00000641919 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
CASC19-265ENST00000641919 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
CASC19-265ENST00000641919 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
CASC19-265ENST00000641919 FOXD1Q16676 465 aa22.9■■□□□ 1.26
CASC19-265ENST00000641919 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
CASC19-265ENST00000641919 MSH5O43196 834 aa21.49■■□□□ 1.03
CASC19-265ENST00000641919 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
CASC19-265ENST00000641919 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
CASC19-265ENST00000641919 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
CASC19-265ENST00000641919 ADRA2BP18089 450 aa21.03■□□□□ 0.96
CASC19-265ENST00000641919 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
CASC19-265ENST00000641919 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
CASC19-265ENST00000641919 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
CASC19-265ENST00000641919 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
CASC19-265ENST00000641919 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
CASC19-265ENST00000641919 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
CASC19-265ENST00000641919 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
CASC19-265ENST00000641919 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
CASC19-265ENST00000641919 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
CASC19-265ENST00000641919 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
CASC19-265ENST00000641919 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
CASC19-265ENST00000641919 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
CASC19-265ENST00000641919 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
CASC19-265ENST00000641919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
CASC19-265ENST00000641919 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
CASC19-265ENST00000641919 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
CASC19-265ENST00000641919 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
CASC19-265ENST00000641919 CAPN15O75808 1086 aa17.07■□□□□ 0.32
CASC19-265ENST00000641919 DSG3P32926 999 aa17.06■□□□□ 0.32
CASC19-265ENST00000641919 POTEHQ6S545 545 aa16.96■□□□□ 0.31
CASC19-265ENST00000641919 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
CASC19-265ENST00000641919 KCNA4P22459 653 aa16.8■□□□□ 0.28
CASC19-265ENST00000641919 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
CASC19-265ENST00000641919 ABCB7O75027 752 aa16.69■□□□□ 0.26
CASC19-265ENST00000641919 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
CASC19-265ENST00000641919 APLP2Q06481 763 aa16.55■□□□□ 0.24
CASC19-265ENST00000641919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
CASC19-265ENST00000641919 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
CASC19-265ENST00000641919 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
CASC19-265ENST00000641919 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
CASC19-265ENST00000641919 POLA2Q14181 598 aa16.16■□□□□ 0.18
CASC19-265ENST00000641919 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
CASC19-265ENST00000641919 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
CASC19-265ENST00000641919 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
CASC19-265ENST00000641919 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
CASC19-265ENST00000641919 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
CASC19-265ENST00000641919 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
CASC19-265ENST00000641919 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
CASC19-265ENST00000641919 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
CASC19-265ENST00000641919 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
CASC19-265ENST00000641919 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
CASC19-265ENST00000641919 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
CASC19-265ENST00000641919 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
CASC19-265ENST00000641919 ZBTB22O15209 634 aa15.47■□□□□ 0.07
CASC19-265ENST00000641919 HAX1O00165 279 aa15.46■□□□□ 0.07
CASC19-265ENST00000641919 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
CASC19-265ENST00000641919 EVX2Q03828 476 aa15.31■□□□□ 0.04
CASC19-265ENST00000641919 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
CASC19-265ENST00000641919 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
CASC19-265ENST00000641919 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
CASC19-265ENST00000641919 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
CASC19-265ENST00000641919 FBLN2P98095 1184 aa15.17■□□□□ 0.02
CASC19-265ENST00000641919 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
CASC19-265ENST00000641919 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
CASC19-265ENST00000641919 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
CASC19-265ENST00000641919 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
CASC19-265ENST00000641919 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
CASC19-265ENST00000641919 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
CASC19-265ENST00000641919 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
CASC19-265ENST00000641919 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
CASC19-265ENST00000641919 GABBR2O75899 941 aa14.88□□□□□ -0.03
CASC19-265ENST00000641919 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
CASC19-265ENST00000641919 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
CASC19-265ENST00000641919 LHX8Q68G74 356 aa14.73□□□□□ -0.05
CASC19-265ENST00000641919 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
CASC19-265ENST00000641919 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
CASC19-265ENST00000641919 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
CASC19-265ENST00000641919 CLCN6P51797 869 aa14.36□□□□□ -0.11
CASC19-265ENST00000641919 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
CASC19-265ENST00000641919 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
CASC19-265ENST00000641919 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
CASC19-265ENST00000641919 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
CASC19-265ENST00000641919 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
CASC19-265ENST00000641919 GALR2O43603 387 aaPredicted RBP14.25□□□□□ -0.13
CASC19-265ENST00000641919 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
CASC19-265ENST00000641919 PLSCR2Q9NRY7 297 aa14.15□□□□□ -0.14
CASC19-265ENST00000641919 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
CASC19-265ENST00000641919 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
CASC19-265ENST00000641919 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
CASC19-265ENST00000641919 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
CASC19-265ENST00000641919 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
CASC19-265ENST00000641919 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
CASC19-265ENST00000641919 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
CASC19-265ENST00000641919 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
CASC19-265ENST00000641919 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
CASC19-265ENST00000641919 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
CASC19-265ENST00000641919 POTEMA6NI47 508 aa13.89□□□□□ -0.19
CASC19-265ENST00000641919 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
CASC19-265ENST00000641919 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms