RNA–Protein interactions for RNA: ENST00000641635.1

SAMMSON-219, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,162 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-219ENST00000641635 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
SAMMSON-219ENST00000641635 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
SAMMSON-219ENST00000641635 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
SAMMSON-219ENST00000641635 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
SAMMSON-219ENST00000641635 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SAMMSON-219ENST00000641635 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
SAMMSON-219ENST00000641635 MSH5O43196 834 aa17.19■□□□□ 0.34
SAMMSON-219ENST00000641635 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
SAMMSON-219ENST00000641635 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
SAMMSON-219ENST00000641635 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SAMMSON-219ENST00000641635 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SAMMSON-219ENST00000641635 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
SAMMSON-219ENST00000641635 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
SAMMSON-219ENST00000641635 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
SAMMSON-219ENST00000641635 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
SAMMSON-219ENST00000641635 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
SAMMSON-219ENST00000641635 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
SAMMSON-219ENST00000641635 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
SAMMSON-219ENST00000641635 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
SAMMSON-219ENST00000641635 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
SAMMSON-219ENST00000641635 KCNA4P22459 653 aa14.93□□□□□ -0.02
SAMMSON-219ENST00000641635 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
SAMMSON-219ENST00000641635 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
SAMMSON-219ENST00000641635 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
SAMMSON-219ENST00000641635 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
SAMMSON-219ENST00000641635 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
SAMMSON-219ENST00000641635 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
SAMMSON-219ENST00000641635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
SAMMSON-219ENST00000641635 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
SAMMSON-219ENST00000641635 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
SAMMSON-219ENST00000641635 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
SAMMSON-219ENST00000641635 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
SAMMSON-219ENST00000641635 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
SAMMSON-219ENST00000641635 MYT1Q01538 1121 aa13.89□□□□□ -0.19
SAMMSON-219ENST00000641635 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
SAMMSON-219ENST00000641635 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
SAMMSON-219ENST00000641635 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SAMMSON-219ENST00000641635 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
SAMMSON-219ENST00000641635 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
SAMMSON-219ENST00000641635 ZBTB22O15209 634 aa13.74□□□□□ -0.21
SAMMSON-219ENST00000641635 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
SAMMSON-219ENST00000641635 DSG3P32926 999 aa13.69□□□□□ -0.22
SAMMSON-219ENST00000641635 APLP2Q06481 763 aa13.68□□□□□ -0.22
SAMMSON-219ENST00000641635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SAMMSON-219ENST00000641635 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
SAMMSON-219ENST00000641635 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-219ENST00000641635 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-219ENST00000641635 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
SAMMSON-219ENST00000641635 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-219ENST00000641635 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
SAMMSON-219ENST00000641635 ABCB7O75027 752 aa13.47□□□□□ -0.25
SAMMSON-219ENST00000641635 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
SAMMSON-219ENST00000641635 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
SAMMSON-219ENST00000641635 ABCC9O60706 1549 aa13.38□□□□□ -0.27
SAMMSON-219ENST00000641635 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
SAMMSON-219ENST00000641635 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
SAMMSON-219ENST00000641635 POLA2Q14181 598 aa13.2□□□□□ -0.3
SAMMSON-219ENST00000641635 ATF5Q9Y2D1 282 aaPredicted RBP13.2□□□□□ -0.3
SAMMSON-219ENST00000641635 POTEHQ6S545 545 aa13.16□□□□□ -0.3
SAMMSON-219ENST00000641635 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-219ENST00000641635 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
SAMMSON-219ENST00000641635 ARXQ96QS3 562 aa13.06□□□□□ -0.32
SAMMSON-219ENST00000641635 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-219ENST00000641635 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
SAMMSON-219ENST00000641635 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
SAMMSON-219ENST00000641635 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
SAMMSON-219ENST00000641635 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
SAMMSON-219ENST00000641635 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
SAMMSON-219ENST00000641635 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
SAMMSON-219ENST00000641635 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
SAMMSON-219ENST00000641635 FBLN2P98095 1184 aa12.7□□□□□ -0.38
SAMMSON-219ENST00000641635 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
SAMMSON-219ENST00000641635 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
SAMMSON-219ENST00000641635 EIF5BO60841 1220 aaKnown RBP12.63□□□□□ -0.39
SAMMSON-219ENST00000641635 HOMEZQ8IX15 550 aa12.6□□□□□ -0.39
SAMMSON-219ENST00000641635 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
SAMMSON-219ENST00000641635 TULP1O00294 542 aaPredicted RBP12.54□□□□□ -0.4
SAMMSON-219ENST00000641635 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
SAMMSON-219ENST00000641635 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
SAMMSON-219ENST00000641635 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
SAMMSON-219ENST00000641635 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
SAMMSON-219ENST00000641635 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
SAMMSON-219ENST00000641635 FKBP8Q14318 412 aa12.45□□□□□ -0.42
SAMMSON-219ENST00000641635 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
SAMMSON-219ENST00000641635 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
SAMMSON-219ENST00000641635 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
SAMMSON-219ENST00000641635 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
SAMMSON-219ENST00000641635 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
SAMMSON-219ENST00000641635 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
SAMMSON-219ENST00000641635 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
SAMMSON-219ENST00000641635 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
SAMMSON-219ENST00000641635 BCANQ96GW7 911 aa12.33□□□□□ -0.44
SAMMSON-219ENST00000641635 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
SAMMSON-219ENST00000641635 HAX1O00165 279 aa12.32□□□□□ -0.44
SAMMSON-219ENST00000641635 PODXL2Q9NZ53 605 aa12.31□□□□□ -0.44
SAMMSON-219ENST00000641635 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.45
SAMMSON-219ENST00000641635 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
SAMMSON-219ENST00000641635 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
SAMMSON-219ENST00000641635 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-219ENST00000641635 PROM2Q8N271 834 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms